Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g1899 ATGAACAGAGAAGATCTGTTGAAGTCATCCACTTCGGACCACCGGGACAATCAGATGGAAACGATGATGATGCAACTTCCTGAATTCTCTGGAGCCTACAGCAACAACGACGTCGTTTCCGACGACTTTACACTGCCTGAGATCTCCCCGGCCGGTACTAGGACGACGGACACCGACATACACGGAACTATGCTGCCTTTTTTCGACAACTCGCCTGTGATGTCGCCGTCATCATTCACAAGCTTACAGTCTGCTACAATTTCCTTCACTAACCCTACTCCGATGCTACAAGAGCGAGATCCACCGCCCTGCGGAGGAAACGCGAGCGGTAGAGCGGCGTCGGAGAAAGGGATGTCAATGGCGGCGATGAGGGAGATGATATTCAGGATAGCGGTGATGCAGCCAATACACATAGACCTGGAGGCAGTGAAGCCACCGAAGCGGAGGAACGTGAAGATCTCGAAGGACCCTCAGAGCGTGGCGGCTCGCCACCGCAGAGAGAGGATCAGCGAGAGAATAAGGATACTGCAGAGGCTGGTTCCGGGAGGGACTAAGATGGACACAGCTTCCATGTTAGACGAAGCTATTCACTATGTGAAGTTTCTCAAGACTCAAGTTCAGTCACTCGAACGGGCTGCAGCCACTAAGCCTACAGGGATAGGATTCCCTGTGGCCATGTCCACTGCTGCATCTTCCTCCTCCTCCTATCTTCCGATCCCGTCAAAACCTTACCAATTTCCTCCTCAAAATGTTCCGCATTACGGACATGATGCATAA 777 0.5225 MNREDLLKSSTSDHRDNQMETMMMQLPEFSGAYSNNDVVSDDFTLPEISPAGTRTTDTDIHGTMLPFFDNSPVMSPSSFTSLQSATISFTNPTPMLQERDPPPCGGNASGRAASEKGMSMAAMREMIFRIAVMQPIHIDLEAVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAATKPTGIGFPVAMSTAASSSSSYLPIPSKPYQFPPQNVPHYGHDA 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g1899 258 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 153 202 IPR011598 GO:0046983
Alju07g1899 258 Pfam Helix-loop-helix DNA-binding domain 163 202 IPR011598 GO:0046983
Alju07g1899 258 FunFam BHLH transcription factor 156 219 - -
Alju07g1899 258 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 157 213 IPR036638 GO:0046983
Alju07g1899 258 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 55 237 IPR045843 GO:0003700|GO:0006355
Alju07g1899 258 SMART finulus 159 208 IPR011598 GO:0046983
Alju07g1899 258 Gene3D - 152 217 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g1899 Alju-ChrAlju07 45269689 45270465 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g1899 101 220 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G50330 75.833 8.94e-48 156
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Alju07g1899 HLH 1.6e-06 No_clan