Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g1869 ATGTCTGCAAGGAATGAACACCAGACCGTCCCCCTTTCGGTTCTTCTGAAGCGGGAATTGGCAAACGAGAAAATTGAGAAACCAGAAATTATGCATGGTCAAGCCAGCCAGAGCAAAAAAGGCGAAGATTTCACGCTAATAAAGACGGAATGCCAAAGGGCGGCGGCAGATGGGGTGTCTACTTATTCTGTTTTTGGGTTATTTGATGGGCATAATGGATCTGCTGCTGCAATTTATGCCAAGGAGAATCTCTTAAATAATGTTTTAAGTGCGGTTCCCCCAGATCTTAACAGAGAGGAGTGGGGGTCAGCATTGCCTAGGGCTTTGGTTGCAGGCTTTGTCAAAACTGATAAAGATTTTCAAGAGAAAGGACAAAAATCAGGAACAACAGCAACCTTTGTGATTATTGAAGGATGGGTTGTTACAGTTGCATCAGTTGGTGATTCCCGTTGCATACTTGAGCCTTCCGAAGGTGGGATATATTACTTGTCAGCAGATCATAGGCTTGAAACTAATGAAGAGGAGAGGGAGCGTATAACTGCTAGCGGTGGTGAGGTTGGTCGTCTAAATACTGGTGGAGGTGCACAGGTTGGTCCTTTGAGGTGTTGGCCTGGTGGCTTGTGTCTTTCAAGATCCATTGGTGATATGGATATTGGTGAATATATTGTTCCTGTCCCGTATGTGAAGCAAGTGAAGCTGTCCACAGCTGGAGGCAGGCTTATTATCTGCAGTGATGGTGTTTGGGATGCTTTGACTGCAGAAGCAGCCCTTGATTGTTGTCGTGGCATGGCAGCAGATGCTGCAGCATCCCTTCTTGTTAGAGAAGCTTTGCAAGCGAAGGGACTTAGAGATGATACTACCTGCATTGTCGTTGATATATTACCACAAGAGAAGCCACCTGCTCCTGTGCAACAACCGAAAAAGGCAGGAAAAATGTTGAAGTCAATGTTTAGAAAAAAGTCCTCTGAATCATCTTCTTGCAATGACAAAGAGTACCAGGAACCAGATGTGGTAGAGGAACTGTACGAGGAAGGATCTGCTATGCTTTCAGAGAGGCTAGACACAAAATACCCGCTCCGCCACATGTTCAAGTTGTTTGTTTGTGCGGTATGTCAAAAGGAGATCAAACCTGGAGAAGGTATTTCAATTCATGCAGGTGTAAAAGTGCGTGACTGGGATGGACCTTTTCTTTGTTTTAGTTGTCAGGAGAAGAAAGAAGCAATGGAAGGGAAAAGAACATCAGATAGACTGAGCAGTGGAAGTGACTGA 1269 0.4492 MSARNEHQTVPLSVLLKRELANEKIEKPEIMHGQASQSKKGEDFTLIKTECQRAAADGVSTYSVFGLFDGHNGSAAAIYAKENLLNNVLSAVPPDLNREEWGSALPRALVAGFVKTDKDFQEKGQKSGTTATFVIIEGWVVTVASVGDSRCILEPSEGGIYYLSADHRLETNEEERERITASGGEVGRLNTGGGAQVGPLRCWPGGLCLSRSIGDMDIGEYIVPVPYVKQVKLSTAGGRLIICSDGVWDALTAEAALDCCRGMAADAAASLLVREALQAKGLRDDTTCIVVDILPQEKPPAPVQQPKKAGKMLKSMFRKKSSESSSCNDKEYQEPDVVEELYEEGSAMLSERLDTKYPLRHMFKLFVCAVCQKEIKPGEGISIHAGVKVRDWDGPFLCFSCQEKKEAMEGKRTSDRLSSGSD 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g1869 422 Gene3D - 31 299 IPR036457 -
Alju07g1869 422 PANTHER PROTEIN PHOSPHATASE 31 292 IPR015655 GO:0004722|GO:0006470
Alju07g1869 422 SUPERFAMILY PP2C-like 37 293 IPR036457 -
Alju07g1869 422 Pfam Protein phosphatase 2C 54 278 IPR001932 -
Alju07g1869 422 SMART PP2C_SIG_2 47 293 IPR001932 -
Alju07g1869 422 FunFam probable protein phosphatase 2C 12 32 299 - -
Alju07g1869 422 ProSiteProfiles PPM-type phosphatase domain profile. 24 293 IPR001932 -
Alju07g1869 422 CDD PP2Cc 39 293 IPR001932 -
Alju07g1869 422 SMART PP2C_4 21 291 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g1869 Alju-ChrAlju07 45018087 45022372 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g1869 1 422 PP2C-type Phosphatase Gene Family AT1G47380 77.570 0.0 693
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju07g1869 07 45018087 45022372 Alju08g1090 08 8174855 8179275 CCT
Alju07g1869 07 45018087 45022372 Alju07g1869 07 45018087 45022372 ECH