Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g1867 ATGGTGGCGCCCAGACTATCATCCTACGAGGAGAGTCGTCGCAAAAGAATGGAGGAGAACAAGAAGCGAATCGAAGCCCTCAATTTGACCCAGCTTTCTATAGCCCTCCGAAATTCCCCTTCTCCCAAACCCTCTCCTATGAAGCACACCAAATCTCGCTCAACGGAAAAAATGATTGTTGCTGTAAGGAGGTCTGGCCGGGTCGCAAACATGGTGGCTCCTGTTTACAAAGAAGTGCTTATTGATCGTGTGGCAATACCTAGAAGGGTTTATGGGACCAAAAGAAATTTATCAAACTTCGTACACGCTTCAGAGGAGGCCAGAGAGGAAGCTTTTGAAAAAGCAGAGAAGTTACTCGCGGATTTAGAATCTGAATATCCGACATTCATAAAGTCAATGCTTCCGTCACATGTAAGCGGGGGATTTTGGCTGGGTCTTTCAGTCCAGTTCTGCAAGACTCATCTTCCAAAGCGGGACGAAATGATTACTTTGATAGATGAAGAGGGGGATGAGTATCCCACGGTATATTTGGCTCGTAAAACTGGACTCAGCGGTGGATGGAAAGGTTTTGCGGTTGCTCATAACCTAGCTGACGGGGACGCATTAGTTTTTCAGCTAATCAGACCTACATCATTTAAGGTGCACATTATTAGAGTGAAGAGTCCTACTCCTACAGAAGGCAATTAG 687 0.4585 MVAPRLSSYEESRRKRMEENKKRIEALNLTQLSIALRNSPSPKPSPMKHTKSRSTEKMIVAVRRSGRVANMVAPVYKEVLIDRVAIPRRVYGTKRNLSNFVHASEEAREEAFEKAEKLLADLESEYPTFIKSMLPSHVSGGFWLGLSVQFCKTHLPKRDEMITLIDEEGDEYPTVYLARKTGLSGGWKGFAVAHNLADGDALVFQLIRPTSFKVHIIRVKSPTPTEGN 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g1867 228 SUPERFAMILY DNA-binding pseudobarrel domain 123 219 IPR015300 -
Alju07g1867 228 Coils Coil 105 125 - -
Alju07g1867 228 Pfam B3 DNA binding domain 129 218 IPR003340 GO:0003677
Alju07g1867 228 Gene3D - 103 221 IPR015300 -
Alju07g1867 228 MobiDBLite consensus disorder prediction 1 22 - -
Alju07g1867 228 CDD B3_DNA 127 218 IPR003340 GO:0003677
Alju07g1867 228 MobiDBLite consensus disorder prediction 35 55 - -
Alju07g1867 228 ProSiteProfiles B3 DNA-binding domain profile. 129 220 IPR003340 GO:0003677
Alju07g1867 228 MobiDBLite consensus disorder prediction 8 22 - -
Alju07g1867 228 SMART B3_2 129 220 IPR003340 GO:0003677
Alju07g1867 228 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 33 220 IPR044837 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g1867 Alju-ChrAlju07 45012918 45014710 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g1867 56 221 B3 DNA Binding Superfamily AT5G42700 61.446 2.36e-68 206
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Alju07g1867 B3 1.1e-15 CL0405