Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g1860 ATGGAAGAGAAGAAAGAGCTGACATTGAGCAGTGATGCAACTGTCATGGCTCATGGAAAGTTTGGATGTACAAGCTCTCACATTTCTCAGACTGGAGAAAACAAGGATGTTGCAGCTCACAGTTTGAGCTTCGACAAGAGGGTGGAGAACTCGCGTGGTGGTGGAACTGTCATTCGCAAAGCTAAATCATTGAGTGCTCAATTCTTGATCAACATTGATGGCCTAATCAATAATGTTGCAGGAAGCTATCATCAGATGGATTCCAACGTTAAAATTGGTTCCTCTAGCAAGGAATTAAGATATTCCCTTTCATTCACTGCCCCCGCCTCACTCTCACATGAACTCTCAGAAGTCTTGAAGCTTCCAAGCCCCAAATGCGAAGAAGCTGGTGCATCTGATGTTTCTGAAGAGGAGGAATTAGATTCATGCGAGTTGACAAGAATTCACATGGAACCTACCTTGCCAATACATCTGAAGTTTGAAGATGTGAAATACAAGGTTCCAGAGAAAGGTGAGAGGTCTTCTGAAGAAGGAAAGTATGTTCTGCATGGGATCACGGGTTCAGTACGCCCAGGAGAGATTCTTGCTCTAATGGGACCATCTGGAGGTGGTAAAACAACATTGCTTAATATCTTGAGCGGAAGGACCAAGTTTAATGGTGGTTCTATCACTTACAATGACAAACCATATACCAAGTCATTAAAGCAGAGGATTGGATATGTAACGCAAGATGATGTGGTGTTCCCTCATCTTACAGTCAAGGAAACTCTCACATATGTAGCTTTGCTCCGTCTCTCCAAGGATCTATCAATATCACAGAAAAAAGAGAGGGTTATGAATGTTTTAAGTGAACTATGCCTCGAAAGATGCCAAGATACAGAAATTGGTGGCAAATTTATTAGAGGGGTCTCTGGGGGTGAGAGAAAAAGGGTCTGCATTGGCACAGAAATCCTTCTCAATCCATCACTTCTGTTCTTAGATGAACCAACATCTGGTCTAGATTCAACCACAGCGTCAAGAATTGTTCAGATTCTTCAAACCATTGCAAAAGAGGGAAAGACAGTGGTGACAACAATACACCAGCCGTCAAGTAAACTGTTCAACATGTTTGACAAGTTGATTCTGTTGGGAAAAGGAAGCACTTTGTACTTTGGAAAAGCATCTGATGCAATGATGTACTTCTCCTCTATTGGTTGTTCTCCATTAATAGCCATGAACCCTGCAGAGTTCCTCATTGACCTTGCAAATGGCAACATGTTTGACAAATCTGTCCCTTCAGAACTTGAGGATAAGTTCCAATATGGAATCAAAAGACTCAACATAAAAAACAACACACCCTCCCCAATTGATGTACACGAGTTTCTTGTCAAGGCCTATGAAATAAGGCTTGCAGAAAGAGAGAAAGCAATGCTTCTGGAACCTGTGACTATTAGGGGAGATCAGAGTGGGATGATGCAAGGCAGGCCATTGGTGAGGGACTTTGGAGCAACTTGGTCTCAACAATTTTGCATTCTCTTCATGAGAGGCATTAGGGAGAGGCGTCACGAGTATTTCAGCTGTCTGCGTGTAACCCAAGTAATATCAACTGCAATTATTGTTGGACTACTTTGGTGGAACTCTGGTTCTTCTTCTCTCCATGATCAGGCAGGGCTATTGTTCTTCCTTTCTGTGTTCTGGGGCTTCTATCCTCTATTTACTGCTGTCTTCATGTTCCCACAAGAAAGAGCAATGCTAGTGAAAGAGAGATCGATTGACATGTATAAACTCAGTGCTTACTTCTTAGCTAAGAACACCAGTGATATCCCAATGGAGCTTCTAATGCCTCCAGTGTTCATGGTGATTGTTTACTTCATGGTTGGCTTGAAGCTGCAATTTTCTGCATTTTCCCTCACCATCCTCACAATTTTTCTCAGTGTTCTAGCAGCTCAGGGTCTTGGACAAACCATAAGTGCAGCATTTCTGGATGTGAAGAAAGCTACAACACTAGCTTCAATCGTTGTCATGACCTTCATGCTAACTGGCGGATTCTTTAGCCAACAAGTGCCAAGGTTTATGTCATGGGTTCGCTACCTCTCTTTCAACTACCACACTTACAGGTTGCTTTTGAAAATCCAGTATGGATGTGTGGATTCAACTTCTGCATCAGGTTGCAGTGAGTCTCATTTAGTGAAAAATAATAGTGAGACTAAATTCGGGAGGGAACTGGAAGTTGTTGCTATGATAATAATGATTTTTGCTTATCGGCTAATAGCGTATTTATGTCTAAGGAGAATGAAAATAAGGACTAATTAA 2292 0.4197 MEEKKELTLSSDATVMAHGKFGCTSSHISQTGENKDVAAHSLSFDKRVENSRGGGTVIRKAKSLSAQFLINIDGLINNVAGSYHQMDSNVKIGSSSKELRYSLSFTAPASLSHELSEVLKLPSPKCEEAGASDVSEEEELDSCELTRIHMEPTLPIHLKFEDVKYKVPEKGERSSEEGKYVLHGITGSVRPGEILALMGPSGGGKTTLLNILSGRTKFNGGSITYNDKPYTKSLKQRIGYVTQDDVVFPHLTVKETLTYVALLRLSKDLSISQKKERVMNVLSELCLERCQDTEIGGKFIRGVSGGERKRVCIGTEILLNPSLLFLDEPTSGLDSTTASRIVQILQTIAKEGKTVVTTIHQPSSKLFNMFDKLILLGKGSTLYFGKASDAMMYFSSIGCSPLIAMNPAEFLIDLANGNMFDKSVPSELEDKFQYGIKRLNIKNNTPSPIDVHEFLVKAYEIRLAEREKAMLLEPVTIRGDQSGMMQGRPLVRDFGATWSQQFCILFMRGIRERRHEYFSCLRVTQVISTAIIVGLLWWNSGSSSLHDQAGLLFFLSVFWGFYPLFTAVFMFPQERAMLVKERSIDMYKLSAYFLAKNTSDIPMELLMPPVFMVIVYFMVGLKLQFSAFSLTILTIFLSVLAAQGLGQTISAAFLDVKKATTLASIVVMTFMLTGGFFSQQVPRFMSWVRYLSFNYHTYRLLLKIQYGCVDSTSASGCSESHLVKNNSETKFGRELEVVAMIIMIFAYRLIAYLCLRRMKIRTN 763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g1860 763 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 158 403 IPR003439 GO:0005524
Alju07g1860 763 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 133 752 - -
Alju07g1860 763 Pfam ABC-2 type transporter 500 706 IPR013525 GO:0016020|GO:0140359
Alju07g1860 763 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 160 391 IPR027417 -
Alju07g1860 763 CDD ABCG_EPDR 155 385 - -
Alju07g1860 763 SMART AAA_5 191 380 IPR003593 GO:0016887
Alju07g1860 763 FunFam ABC transporter G family member 22 169 397 - -
Alju07g1860 763 ProSitePatterns ABC transporters family signature. 303 317 IPR017871 GO:0005524|GO:0016887
Alju07g1860 763 Gene3D - 157 396 IPR027417 -
Alju07g1860 763 Pfam ABC-2 type transporter 360 422 IPR043926 GO:0140359
Alju07g1860 763 Pfam ABC transporter 182 331 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g1860 Alju-ChrAlju07 44932232 44935457 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g1860 181 385 Calmodulin-binding Proteins AT2G36910 29.048 2.94e-14 75.1