LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Alju07g1857	ATGGGCAAGGAAATGAACCTGTTAATAACTTTATCAGCAGCCTTCGTCATTGGGGCAATTTTCGCAAGTGTTGGTGCTGAGCCAGTGGAAGATAAAAAAGCGTTGCTTGATTTCTATAGCAATATTGGTCAGTCTCATCCTCTTAACTGGGATGAGAATTCTTCTGCATGCAAAAGTTGGAGAGGAGTGTTCTGCAACAGTGAACAATCCAGAGTCATAGCCCTCCATTTACCAGGAGCTGGGTTGATTGGTCCAATCCCATCTAATACTCTTAGTCGTCTCTCTGAACTTCAAACTTTGAGTCTTAGATCCAACAGAATAACGGGTCCTTTCCCTCCTGATTTGTCTGAGCTTAAAAATTTGAGCTTTGTTTATCTCCAGTTCAACAAGTTTTCTGGTCCATTACCATCGGATTTTTCTGTTTGGAGTAATCTTAATGCTATCAATTTGTCCAATAATTCTTTTAATGGAAGCATCCCTTCTTCCATTGGAAAATTGACTCATCTCACATCTTTAGTCTTAGCCAACAACTCGCTTTCCGGCGAAATTCCTGACATCGATATTCCTAGCCTAAAAGAGCTCAATCTGGCCTACAACCACCTTAGTGGGGTTGTGCCTAAATCCTTTGAGAGATTTCCAAGTTCAGCTTTTGCTGGTAACAACAATCTTACAACAGAAAATACACTTCCTCCAGCTATTCCACTTGAACCACCAACTGCTCCACCAAAAAAGAAAGCCACACTAAGCGAGCCTGTATTGTTAGCTATTATCATTGGTGGCTGTGTGATATTGTTTCTGGTTATTGCAGCTTTAATGCTTATCCGCAGCTATCAGAATGGAGATAAACAAGTGCCAGCAGTGAAGTCAAAGAAAAAGGAAGAGTCATTGAAAAAAGAAGTGTCTGAAACTCTGAGTCAAGACAAGAACAAGATAGTGTTCTTTGAGGGTCGCCATCTTGCCTTTGACCTGGAAGACCTGTTGAGGTCATCTGCTGAGGTACTAGGAAAAGGAAGCTTCGGAACGACATATAAGGCCGCTCTAGACGATGTAACCACGGTGGTGGTGAAGAGATTGAAAGAAGTGGTGGTCGGAAAACGTGAGTTTGAACAGCAGATGGAGGTGGTGGGGAGGATTAGGCACGATAATGTGGCTCCATTGAGGGCTTATTACTATTCCAAGGAAGAGAAGCTTATGGTGTATGATCACTTCGAAGAGGGTAGCGTTTCTGCAATGTTGCATGGTAGAAAAGGGGAAGGCAAGGCTTCTTTAGATTGGGATAGCCGGATGAGAATTGCAATTGGAGCAGCAAGAGGGATGGCTCACATCCACACACAGCATGGAGGGAAACTAGTACATGGGAACCTAAAAGCCTCAAACGTGTTCATAAACTCTCAAGGATATGGCTGTGTATCTGATGCAGGTTTGGCCACATTAACAAGTTCAATACCCTTACCGGCACAGAGAACTGGAGGGTACCGTGCACCGGAAGTAACAGACATCAGAAAAGCGAGCCACGCGGCTGATGTATACAGTTTCGGGGTGATGGTGCTTGAGCTTCTCACTGGGAAATCACCCATACACGCCACGGGGAGCGAGGAGGTGGTGCATCTGGTGAGGTGGGTGAATTCCGTGGTGAGAGAGGAGTGGACAGCGGAGGTGTTTGATGTTGAGTTACTGAGATATTCAAATATTGAGGAAGAAATGGTAGAGATGTTGCAGATAGGGATGGCTTGTGTGGTGAGGGTGCCAGAACGGAGACCAAAAATGCAACATGTTGTGAGGATGTTGGAGGAAGTTCGTAAGGTGAATACTGGAACCCAATCATCCACAGAAGGTTCCACCCCGACCCCACAAGCAATTATTGATGTACCTTCTTCGTCTGTTCCACAATAA	1893	0.4464	MGKEMNLLITLSAAFVIGAIFASVGAEPVEDKKALLDFYSNIGQSHPLNWDENSSACKSWRGVFCNSEQSRVIALHLPGAGLIGPIPSNTLSRLSELQTLSLRSNRITGPFPPDLSELKNLSFVYLQFNKFSGPLPSDFSVWSNLNAINLSNNSFNGSIPSSIGKLTHLTSLVLANNSLSGEIPDIDIPSLKELNLAYNHLSGVVPKSFERFPSSAFAGNNNLTTENTLPPAIPLEPPTAPPKKKATLSEPVLLAIIIGGCVILFLVIAALMLIRSYQNGDKQVPAVKSKKKEESLKKEVSETLSQDKNKIVFFEGRHLAFDLEDLLRSSAEVLGKGSFGTTYKAALDDVTTVVVKRLKEVVVGKREFEQQMEVVGRIRHDNVAPLRAYYYSKEEKLMVYDHFEEGSVSAMLHGRKGEGKASLDWDSRMRIAIGAARGMAHIHTQHGGKLVHGNLKASNVFINSQGYGCVSDAGLATLTSSIPLPAQRTGGYRAPEVTDIRKASHAADVYSFGVMVLELLTGKSPIHATGSEEVVHLVRWVNSVVREEWTAEVFDVELLRYSNIEEEMVEMLQIGMACVVRVPERRPKMQHVVRMLEEVRKVNTGTQSSTEGSTPTPQAIIDVPSSSVPQ	630

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Alju07g1857	630	Gene3D	Ribonuclease Inhibitor	29	235	IPR032675	-
	Alju07g1857	630	FunFam	Probable inactive receptor kinase RLK902	28	187	-	-
	Alju07g1857	630	FunFam	protein STRUBBELIG-RECEPTOR FAMILY 8	403	610	-	-
	Alju07g1857	630	Pfam	Leucine Rich Repeat	190	211	IPR001611	GO:0005515
	Alju07g1857	630	SUPERFAMILY	L domain-like	43	214	-	-
	Alju07g1857	630	Pfam	Protein kinase domain	331	594	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Alju07g1857	630	ProSiteProfiles	Protein kinase domain profile.	328	599	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Alju07g1857	630	FunFam	pollen receptor-like kinase 1	297	402	-	-
	Alju07g1857	630	MobiDBLite	consensus disorder prediction	601	630	-	-
	Alju07g1857	630	ProSitePatterns	Protein kinases ATP-binding region signature.	334	365	IPR017441	GO:0005524
	Alju07g1857	630	Gene3D	Transferase(Phosphotransferase) domain 1	403	616	-	-
	Alju07g1857	630	PANTHER	OS05G0588300 PROTEIN	10	609	-	-
	Alju07g1857	630	Pfam	Leucine rich repeat N-terminal domain	30	66	IPR013210	-
	Alju07g1857	630	SUPERFAMILY	Protein kinase-like (PK-like)	331	597	IPR011009	-
	Alju07g1857	630	Gene3D	Phosphorylase Kinase; domain 1	290	402	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Alju07g1857	Alju-ChrAlju07	44902121	44904333	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Alju07g1857	20	611	Receptor kinase-like Gene Family	AT4G23740	53.202	0.0	650

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-III	Alju07g1857		Pkinase	5.8e-31	CL0016