Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g1840 ATGTCCTGTTCAGTCTTCACCATTGGGAATTTGTTTGGTCAAGCACTCTGTTCCTTCCCTGTAGGCCTGGAACTATGTAATCAGCGTTGGAAAGAATTAGTACTGGAGAATTATAGCATCAATATGAAATACATGTTTCTTCTCATTGTCACTTTCAAGATTATCAAGAAGAAGCTAAGCAAGCTGCAAGAGGCAATGGGATTCCAAACACCCCATTCAAGTAAACCCACCAAAGTGCAACCTGTTACCAAACCCATTCCCTCGTCCTACGATTCATGGATGGCGAGGCATCCTTCAGCGTTGGGTTCATTTGATAGATTGATGAAAGCAGCAAGTGGGAAGGACATGGTTGTGTTTTTAGACTATGATGGAACCTTATCACCCATTGTAAATGACCCTGATCGTGCTTTTATGTCTGAGGAGATGCGTGCAGCAGTGTGTGAAGTTGCTAAAAATTTCCCAACTGCAATCATTAGTGGAAGAAGCAGAGACAAGGTTAAAGACTTTGTGAAGTTAAATAATGTGTATTATGCTGGAAGTCATGGGATGGATATAATGGCACCATCAATGCCAGCTAGATCTTCTGATGGTGACCACTATAACATGGCCCTCGACACCACAAAGGACAATGGGGTTCCCTTTCAACCTGCGAAGAAATTTTTGCCTGCAATTCGAGAGATATTGAAACTGTTAGAGAATAAAATCAAAGGCATACAAGGTGCAACGCTAGAGGACAATGGATTCTGCGTTTCTGTACACTTTCGGCAAGTTCAAGAAAAGGACTATGTTGAATTAGAAGAGAGGGTGAAGTCTGTGCTTGAAAAGCATCCAGAATTTTGCTTAACTGAGGGTAAAAAGGTTCTGGAGATAAGGCCATCAATAGAATGGAACAAAGGTCATGCACTGGAATATTTTCTGGACACACTAGGGTTAAGCAGTTCCAGCAATATCCTTCCGGTGTACATCGGTGATGATCGAACCGATGAAGATGCTTTTAAGGTGATACAAAAGAGAGGACAAGGCTATCCAATTGTAGTGTCTTCAATTCCAAAGGACACAAAAGCTCTGTATTCTCTGCGAGACCCATCAGAAGTGCTAATTTTCTTGTCACGTCTGGCGAAATGGAGGAAATCCATTATTGGCTCCAATTAA 1152 0.4184 MSCSVFTIGNLFGQALCSFPVGLELCNQRWKELVLENYSINMKYMFLLIVTFKIIKKKLSKLQEAMGFQTPHSSKPTKVQPVTKPIPSSYDSWMARHPSALGSFDRLMKAASGKDMVVFLDYDGTLSPIVNDPDRAFMSEEMRAAVCEVAKNFPTAIISGRSRDKVKDFVKLNNVYYAGSHGMDIMAPSMPARSSDGDHYNMALDTTKDNGVPFQPAKKFLPAIREILKLLENKIKGIQGATLEDNGFCVSVHFRQVQEKDYVELEERVKSVLEKHPEFCLTEGKKVLEIRPSIEWNKGHALEYFLDTLGLSSSSNILPVYIGDDRTDEDAFKVIQKRGQGYPIVVSSIPKDTKALYSLRDPSEVLIFLSRLAKWRKSIIGSN 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g1840 383 FunFam Trehalose 6-phosphate phosphatase 222 380 - -
Alju07g1840 383 SUPERFAMILY HAD-like 117 377 IPR036412 -
Alju07g1840 383 Gene3D - 215 380 IPR023214 -
Alju07g1840 383 Gene3D - 116 197 IPR023214 -
Alju07g1840 383 Pfam Trehalose-phosphatase 119 363 IPR003337 GO:0003824|GO:0005992
Alju07g1840 383 Coils Coil 255 275 - -
Alju07g1840 383 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 58 378 IPR044651 GO:0004805|GO:0005992
Alju07g1840 383 NCBIfam HAD-IIB family hydrolase 118 336 IPR006379 -
Alju07g1840 383 NCBIfam trehalose-phosphatase 114 374 IPR003337 GO:0003824|GO:0005992
Alju07g1840 383 CDD HAD_TPP 117 365 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g1840 Alju-ChrAlju07 44702481 44706342 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g1840 114 379 Trehalose Biosynthesis Gene Families AT4G17770 25.090 6.11e-08 52.8