Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g1834 ATGAATGAGCAAGAGAAGTTTGTGAGGTTTCGGGATTGGAGTTCAGACAAGGGTTCTGAAAGTCAGTATTCTGAAAATTCCATAACCCACCCAGGGAGAATAAGAAGCACGCTAAATTCAATTTCATCTAAGTTTCAAAGAGGATTTGAATCTGGTTCTGAGAGTATAAAGAGATTTAGAAAATCATTCAAATCTTTTCCCTCTGATAGTCATTTGGGCTGGAGTTTCAGTTCTAGAAAGAAAATCCTTGATCCACAAGGCCCATTCCTTCAGAAGTGGAACAAGATATTTGTATTATCATGTATTATTGCTGTATCACTCGATCCTCTATTCTTTTATGTCCCTGTCATTAATGATGAGAAGAAATGCCTTTCACTGGACAACAAGATGCAGATAACAGCCACTATTTTAAGATCTTTCTCAGATATCTTTTACATAGTCCACATAATTTTCCAATTTCGTACTGGATTTATTGCACCATCTTCTCGAGTATTTGGAAGAGGTGTTTTGGTTGAAGATACTTGGGCAATAGCAAAACGGTATTTGGCATCATACTTCTTTGTTGACATTCTTGCTGTCCTTCCCCTCCCACAGGTGGTGATTTTAATCGTAATTCCAAAGATGGGAGGCTTTAAATCGTTGAACACAAAGAACTTGCTGAAATTTGTTGTTTTCTTCCAATATGTGCCAAGGGTTTTACGAATTATTCCATTATATAGAGAAGTGACAAGGACCTCTGGCATCATCACTGAAACTGCTTGGGCTGGAGCTGCATTTAATCTCTTTCTTTACATGCTTGCGAGTCATGTTGTAGGTGCCTTTTGGTACTTGTTTTCTATAGAAAGAGAGACAACATGCTGGCGAGATGCCTGTCTAAGAAATACTACTACCTGCAACAAGGCATATTTGTATTGTGACCCAAGTCAAGGGTTGAGCAAGATTGCAACATTCTTGAATGCTTCTTGCCCAATAGTGCCGGATTCAGAGAAATTCAATTTTGGAATATTTCTTGATGCGCTTCAATCTGGTGTTGTGGAGTCAAGAGATTTCCCTCAGAAGTTTTTTTACTGCTTTTGGTGGGGCCTCAGAAATCTAAGTTCTCTTGGTCAGAACCTGGAAACAAGTACCTTTGTCTGGGAGATTTGCTTTGCAGTTTTCATATCCATCTTTGGTTTGGTGTTGTTTTCGTTTCTCATTGGAAACATGCAGACATACTTGCAATCAACAACCACAAGATTAGAAGAGATGAGGGTGAAAAGGAGAGATGCAGAACAGTGGATGTCTCATCGACTACTCCCAGATAGTTTAAGAGAGAGAATTAGACGGTATGAACAATACAAATGGCAAGAAACCAGAGGTGTTGATGAAGATAATTTGATCAATAATCTTCCCAAGGATTTGAGAAGGGATATTAAGCGCCATCTTTGCTTGGCTCTGCTGATGAGAGTGCCAATGTTTGAGAAAATGGATGAACAACTGTTGGACGCAATGTGTGACCGACTCAAGCCAGTGCTTCACACCGAAGAAAGTTGCATTGTTCGGGAAGGAGACCCTGTCAGTGAGATGCTCTTCATAATGAGAGGCAAGCTGTTGACGGTGACTACCAATGGCGGGAGAACAGGCTTCTTCAACTCCGAATACCTCAAGGCCGGCGATTTCTGTGGAGAAGAGCTTCTCACATGGGCTCTGGACCCTCATTCCTCGTCCAATCTCCCCATCTCAACCAGGACTGTTCAAACCCTATCAGAAGTTGAAGCCTTTGCTCTAAAAGCCGATGACTTGAAGTTCGTGGCATCGCAGTTTCGACGTCTTCACAGTAAGCAGATTCGCCATACTTTCAGGTTCTACTCGCAACAATGGCGTTCATGGGCTGCATGTTTCATACAAGCAGCATGGCGCCGCTATAGTAAGAAGAAGCTTGAAGAGTCTCTTCGGGAAGAGGAGGATAGGCTGCAAAATGCTCTGGCCAAGGCAGGTGGTAGCTCTCCTAGTTTAGGTGCCACAATATATGCTTCTAGATTTGCTGCTAATGCACTTAGAGCTTTACGCCGAAATACCTCTAGGAAGACGAGGGTACAGGAGAGACTACCACCCATGCTGCTTCAGAAGCCTGCTGAACCTGACTTTACTGCTGAAGAGCAATAG 2145 0.4228 MNEQEKFVRFRDWSSDKGSESQYSENSITHPGRIRSTLNSISSKFQRGFESGSESIKRFRKSFKSFPSDSHLGWSFSSRKKILDPQGPFLQKWNKIFVLSCIIAVSLDPLFFYVPVINDEKKCLSLDNKMQITATILRSFSDIFYIVHIIFQFRTGFIAPSSRVFGRGVLVEDTWAIAKRYLASYFFVDILAVLPLPQVVILIVIPKMGGFKSLNTKNLLKFVVFFQYVPRVLRIIPLYREVTRTSGIITETAWAGAAFNLFLYMLASHVVGAFWYLFSIERETTCWRDACLRNTTTCNKAYLYCDPSQGLSKIATFLNASCPIVPDSEKFNFGIFLDALQSGVVESRDFPQKFFYCFWWGLRNLSSLGQNLETSTFVWEICFAVFISIFGLVLFSFLIGNMQTYLQSTTTRLEEMRVKRRDAEQWMSHRLLPDSLRERIRRYEQYKWQETRGVDEDNLINNLPKDLRRDIKRHLCLALLMRVPMFEKMDEQLLDAMCDRLKPVLHTEESCIVREGDPVSEMLFIMRGKLLTVTTNGGRTGFFNSEYLKAGDFCGEELLTWALDPHSSSNLPISTRTVQTLSEVEAFALKADDLKFVASQFRRLHSKQIRHTFRFYSQQWRSWAACFIQAAWRRYSKKKLEESLREEEDRLQNALAKAGGSSPSLGATIYASRFAANALRALRRNTSRKTRVQERLPPMLLQKPAEPDFTAEEQ 714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g1834 714 FunFam Cyclic nucleotide-gated ion channel 1 483 601 - -
Alju07g1834 714 FunFam Cyclic nucleotide-gated ion channel 1 412 476 - -
Alju07g1834 714 SUPERFAMILY cAMP-binding domain-like 414 607 IPR018490 -
Alju07g1834 714 Coils Coil 637 657 - -
Alju07g1834 714 SMART cnmp_10 485 616 IPR000595 -
Alju07g1834 714 Pfam Ion transport protein 93 412 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Alju07g1834 714 Gene3D Helix hairpin bin 411 476 - -
Alju07g1834 714 Gene3D - 95 409 - -
Alju07g1834 714 MobiDBLite consensus disorder prediction 686 714 - -
Alju07g1834 714 Gene3D Jelly Rolls 483 603 IPR014710 -
Alju07g1834 714 SUPERFAMILY Voltage-gated potassium channels 84 407 - -
Alju07g1834 714 CDD CAP_ED 485 616 IPR000595 -
Alju07g1834 714 MobiDBLite consensus disorder prediction 1 18 - -
Alju07g1834 714 MobiDBLite consensus disorder prediction 1 30 - -
Alju07g1834 714 ProSiteProfiles cAMP/cGMP binding motif profile. 485 569 IPR000595 -
Alju07g1834 714 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 70 709 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g1834 Alju-ChrAlju07 44642095 44649129 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g1834 4 713 Ion Channels AT5G53130 78.151 0.0 1133