Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g1831 ATGAAGAATTTAAAACGTCACCCGCCGTCGCCCACGGCGGGCCTCCGGCAATTAAACACTGATTCCAACTCTATGTGCCCTGACACTGTTATGAAATTGAAGAATGCTCGGCTGAGAAGACTTAAAATCCAGCGATTGAGGTTGAAGTATACCTGTGAAGGGAAAATCCATGTGGCCTCCGGAGATTGTGAGGAGGAGGCCGGCTGTGTGGAGTCGGCAAGTAAAGTTAGGAAGATTCATGAATCGATGCAGATATCATTGTCGTTAACGACGGCGGCGTCGAAGGAGGAGGATAATCGGTCGAGTTTGGAGGGAAAGAACGGCGAGAGATACAAAGAGGATTGCTGTAGTGTGGAGGATTTATCTTACGGTTCGGTGTCGTTGATAGGAAGAAGGAAAGAGATGGAAGATGCGGTGAGCATAGAGGTGGGGTTGGGGGTGAGGGAGAGAACAAAGTGTGACTTCTTTGCGGTTTACGACGGCCACGGTGGGTCCCAGGTGGCGAAGGCGTGCCGGGAGCGATTGTACCAATTGGTGGCGGAGGAATTGGAGACTCGTGGAAGGAATGGTGGCGAAGTGGATTGGGAGGGAATGATGGAATGGTGTTTCGGTAAAATGGATAGCGAACTTGCAGATAATGCGGCGGTGCGGACGATGGGATCTACGGCGGTTGTGGCCGTGGTGGCAAAGGATGAGGTGGTTGTGGCCAATTGCGGCGACAGTAGGGCGGTGATGGGCAGAGGAGGCGAGGCTTTCGCCTTGTCTGATGATCATAAGCCTGATAGACCTGATGAGTTAATGCGAATAGAAGCCGCGGGTGGAAGGGTCATAAACTGGAACGGCCAACGCGTTCTAGGAGTTCTTGCTACCTCTAGATCTATCGGAGACCAATACCTTCGACCTTACGTAATATCAAAGCCAGAAGTGACGGTGACGAAGAGAACTAACAAGGATGAGTTTCTTATACTGGCGAGTGATGGCTTGTGGGACGTGATGTCTAGTGACGCTGCATGTGAGGTTGTAAGGAAATGTCTTAGTGGGCAAGCACGGCGGAATAATAATTCGCCGGGGCTTCAAAATCATCAAAGCCCGGCGAGTGAGGCGGCAGCTGTGTTAGCGGAGCTAGCAATGGCAAAAGGAAGCAAAGATAACACAAGTGTGATAGTAGTTGAGCTCAGGAGCCACATTAATAATAATAACTAA 1203 0.5062 MKNLKRHPPSPTAGLRQLNTDSNSMCPDTVMKLKNARLRRLKIQRLRLKYTCEGKIHVASGDCEEEAGCVESASKVRKIHESMQISLSLTTAASKEEDNRSSLEGKNGERYKEDCCSVEDLSYGSVSLIGRRKEMEDAVSIEVGLGVRERTKCDFFAVYDGHGGSQVAKACRERLYQLVAEELETRGRNGGEVDWEGMMEWCFGKMDSELADNAAVRTMGSTAVVAVVAKDEVVVANCGDSRAVMGRGGEAFALSDDHKPDRPDELMRIEAAGGRVINWNGQRVLGVLATSRSIGDQYLRPYVISKPEVTVTKRTNKDEFLILASDGLWDVMSSDAACEVVRKCLSGQARRNNNSPGLQNHQSPASEAAAVLAELAMAKGSKDNTSVIVVELRSHINNNN 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g1831 400 SMART PP2C_4 112 390 IPR001932 -
Alju07g1831 400 Pfam Protein phosphatase 2C 123 385 IPR001932 -
Alju07g1831 400 Gene3D - 117 399 IPR036457 -
Alju07g1831 400 MobiDBLite consensus disorder prediction 1 22 - -
Alju07g1831 400 CDD PP2Cc 122 392 IPR001932 -
Alju07g1831 400 PANTHER PROTEIN PHOSPHATASE 99 392 IPR015655 GO:0004722|GO:0006470
Alju07g1831 400 SMART PP2C_SIG_2 142 392 IPR001932 -
Alju07g1831 400 FunFam Protein phosphatase 2C 51 115 400 - -
Alju07g1831 400 ProSitePatterns PPM-type phosphatase domain signature. 155 163 IPR000222 GO:0043169
Alju07g1831 400 ProSiteProfiles PPM-type phosphatase domain profile. 122 392 IPR001932 -
Alju07g1831 400 SUPERFAMILY PP2C-like 117 393 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g1831 Alju-ChrAlju07 44585853 44588319 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g1831 101 393 PP2C-type Phosphatase Gene Family AT2G29380 48.232 1.64e-89 273