Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g1830 ATGACCAGAGGGTTTAAAAGCAAGTTGGGTGAAGGAGGATTTGGCACTGTGTACAAAGGCAAGTTACGGAGTGGTCCTTACGTAGCTATTAAGATGTTGGGTAAATCTAAGGCTAATGGTCAAGAATTCATAAGTGAAGTTGCAACTATTGGAAGGATTCATCATGTCCATGTGGTTCGACTCGTTGGATTTTGTATGGAGGATTCAAAGCAAGCTTTGGTTTATGAATTCATGCCTAATGGTTCTCTTGATAAGTTTATTTTCTCCAAAGAGAAGAAATTATCGTTAGCTTATGATAAGATATATGAAATATCATTGGGCGTGGCTCATGGGATTGCTTACCTTCATCATGGTTGTGACAAAAAGATTCTACATTTTGATATTAAGCCACACAATATTTTGCTTGATGATAATTTTATTCCAAAAGTTTCAGATTTCGGCCTTGCCAAATTATGTCCCACTGATGACAGTATCGTCACTTTGACCATGACAAAAGGAACTATAGGATATATGGCTCCTGAACTATTTTATAAAAATATTGGAGGAGTCTCTTACAAAGCTGATGTCTATAGTTTTGGAATGCTTCTAATGGAAATGGCAAGTAAAAAAAGGAATACAAATCCGCGTACTACTGAGCACACAAGTAATACATGGATGTATGATCAATTCGCTCAAAAGGAAGATATTGAAATGGAAGATTTGACTGATGAAGAAAAAGATTTGGCAAAGAAGATGTTCATAATAGCATGGTGGTGCATACAATTGAAACCCGGCGATCGCCCGTGTATGAATAAAGTAATAGAGATGTTAGAAGCAAAAGTTGAGAGCCTTGAGATGCCTCCAAAGCCATTGTTGTATCCTAATGATCAAACTACTGCAGAGGAACATGAATTCAACTCCGACCAAACATCATCATCTGCTTCGGGTGACTACATAAATTCTTCCAATGATGCTAGTGATGATGTTCCAGAGAACAAACTCCAGCAACCAAAATAG 996 0.3745 MTRGFKSKLGEGGFGTVYKGKLRSGPYVAIKMLGKSKANGQEFISEVATIGRIHHVHVVRLVGFCMEDSKQALVYEFMPNGSLDKFIFSKEKKLSLAYDKIYEISLGVAHGIAYLHHGCDKKILHFDIKPHNILLDDNFIPKVSDFGLAKLCPTDDSIVTLTMTKGTIGYMAPELFYKNIGGVSYKADVYSFGMLLMEMASKKRNTNPRTTEHTSNTWMYDQFAQKEDIEMEDLTDEEKDLAKKMFIIAWWCIQLKPGDRPCMNKVIEMLEAKVESLEMPPKPLLYPNDQTTAEEHEFNSDQTSSSASGDYINSSNDASDDVPENKLQQPK 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g1830 331 SUPERFAMILY Protein kinase-like (PK-like) 6 271 IPR011009 -
Alju07g1830 331 FunFam PR5-like receptor kinase 78 282 - -
Alju07g1830 331 Coils Coil 224 244 - -
Alju07g1830 331 SMART serkin_6 3 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju07g1830 331 ProSitePatterns Serine/Threonine protein kinases active-site signature. 123 135 IPR008271 GO:0004672|GO:0006468
Alju07g1830 331 Pfam Protein tyrosine and serine/threonine kinase 5 270 IPR001245 GO:0004672|GO:0006468
Alju07g1830 331 MobiDBLite consensus disorder prediction 297 331 - -
Alju07g1830 331 Gene3D Transferase(Phosphotransferase) domain 1 79 280 - -
Alju07g1830 331 ProSiteProfiles Protein kinase domain profile. 3 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju07g1830 331 ProSitePatterns Protein kinases ATP-binding region signature. 9 31 IPR017441 GO:0005524
Alju07g1830 331 PANTHER RUST RESISTANCE KINASE LR10-RELATED 1 294 IPR045874 GO:0004672
Alju07g1830 331 Gene3D Phosphorylase Kinase; domain 1 9 78 - -
Alju07g1830 331 PIRSF TyrPK_CSF1-R 80 330 - -
Alju07g1830 331 PIRSF TyrPK_CSF1-R 5 95 - -
Alju07g1830 331 MobiDBLite consensus disorder prediction 280 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g1830 Alju-ChrAlju07 44582015 44583010 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g1830 1 305 Receptor kinase-like Gene Family AT5G38280 48.418 8.45e-104 317
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Alju07g1830 PK_Tyr_Ser-Thr 8.2e-49 CL0016