Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g1829 ATGCCGATCAACTCTTCCAGAACTTGTTTGTGGACCTTGGCACTGCTCTTGCTTACCCACACCGGATGGTGCCAGCAACATCGTCACTGCAAGGAATTAAGGTGCGGACGTCATGGTGTTGTTCGATTCCCTTTCCGACTCAACGATAAGCATCCCGTCGAGTGCGGCTATCCTGGCTTTGATATCACTTGTTCTCATCATCATCACCTCCTGCTTCAACTTCCCACACCTTCAGGTTCCGTAGACCTCTTCATCAAACATATTGATTATCAATCCCAAACTCTGCAAGTATACGATCCCCGAAATTGCCTTCCCGCTCTCTTCCCCAAACTCTACAACTCCACAATGTCGCCCTTCAAATTTGAGCCAGCCCAACGGTTCGCAAACATTACTTTCCTCGATTGCTCTTCAACAGGCCATCGGCACCTAAACGGTTTCCTTACCAGCGTTCAAGACATAGACATGTTCTCTTGCCCGATTTATGTTGGGTACTCCTACTATGATTTCATTGATGAGGACCTGCTACTCTGTACCAAGATTGTCGATATTTCATCAAATCAGCTGGCGGATAACATACGGCAAAATGTTTTGTTCCTCAGTTGGATGAAACCAAATTGTACTAGATGCGAATCGAAGGGACAAATGTGTAAATTGATCAAGACTAATGGCACAGAAGATGATATCGAATGTCTTGACCATCTTCCCAAGATATCTAGATCAACTATTAAACTCATTGCAGGTCTAACAACCTCGGGTTCAGTTGTGCTGCTTCTGGTGCTCCTTGTACTCTATAAATACTTTAGATATTTGAGATTGAAAGGAGAAGATCTAGCGAGACTTCAAAAGTTTTTGGATGATTATAGGTTGCACAAACCTACCAGATTCACTTTTTCTGATCTGGAACGAATCACGTGTGGTTTTAAAGAAAAGTTAGGTGAAGGTGCTCATGGAGCAGTGTTCAAAGGAAAGCTTTCCGATGAAATTTTGGTAGCTGTGAAGATGCTCAACAACTCAAAGGATGACGATGGCAAAGAGTTCATAAATGAAATGGGAGTTGTAGCTAAAATCCACCATGTCAACGTGGTTCGCTTATTGGGCTTCTGTGCTGATGGAGTTCACCATGCTCTTGTCTATGATTACTTTCCAAATGGTTCCTTGCAAAACTTCATATCTGCTCCAAATGGCCATGGCTCATTCCTTGGCTGGGAAAAGCTGCAACAAATTGCTATTAGTATAGCCAGAGGGATTGAGTATCTTCACCAAGGCTGTGATCATCAAATTCTTCACTTTGACATCAATCCTCATAATATATTATTGGATGACAACTTCGTTCCAAAAATCTCTGATTTTGGTTTAGTTAAGTTGTGCCCAAAAAATCAAAGTATAGTGTCTGTGACAGCAGCAAGAGGAACTTTAGGTTACATTGCACCAGAAGTTTTTTTTAGAAATTTTGGAAATGTGTCCTGCAAGTCAGATATCTACAGCTTTGGAATGCTACTGATAGAAATAGTAGGAGGAAGAAAGAATACGGACACAATTCAAGAAAATTTCCAAGTTTTATATCCAGAATGGATTCATAGTTTGGTTGAGGGAAGCGACGTACATATCCCAATAGAAAATGAAGAAGACATTAGAATTGCAAAGAAACTAGCTATTGTAGGACTTTGGTGCATTCAATGGCACCCAATAAATCGTCCATCCATGAATAAGGTAGTGCAAATGTTGGGAAGCGACGAAGATAAGTTGGAAGTCCCTCCTACTCCGTTTGACTCCTCTTCCATCAGCACAACTATGGCAGCTTCTGCAAGGCATTTAGGCTTGGAGTTGGAAGTGATTCATGAATTGGAATGA 1851 0.4165 MPINSSRTCLWTLALLLLTHTGWCQQHRHCKELRCGRHGVVRFPFRLNDKHPVECGYPGFDITCSHHHHLLLQLPTPSGSVDLFIKHIDYQSQTLQVYDPRNCLPALFPKLYNSTMSPFKFEPAQRFANITFLDCSSTGHRHLNGFLTSVQDIDMFSCPIYVGYSYYDFIDEDLLLCTKIVDISSNQLADNIRQNVLFLSWMKPNCTRCESKGQMCKLIKTNGTEDDIECLDHLPKISRSTIKLIAGLTTSGSVVLLLVLLVLYKYFRYLRLKGEDLARLQKFLDDYRLHKPTRFTFSDLERITCGFKEKLGEGAHGAVFKGKLSDEILVAVKMLNNSKDDDGKEFINEMGVVAKIHHVNVVRLLGFCADGVHHALVYDYFPNGSLQNFISAPNGHGSFLGWEKLQQIAISIARGIEYLHQGCDHQILHFDINPHNILLDDNFVPKISDFGLVKLCPKNQSIVSVTAARGTLGYIAPEVFFRNFGNVSCKSDIYSFGMLLIEIVGGRKNTDTIQENFQVLYPEWIHSLVEGSDVHIPIENEEDIRIAKKLAIVGLWCIQWHPINRPSMNKVVQMLGSDEDKLEVPPTPFDSSSISTTMAASARHLGLELEVIHELE 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g1829 616 FunFam serine/threonine-protein kinase PBS1-like 278 380 - -
Alju07g1829 616 Pfam Protein kinase domain 308 573 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju07g1829 616 Gene3D Phosphorylase Kinase; domain 1 280 380 - -
Alju07g1829 616 ProSiteProfiles Protein kinase domain profile. 305 582 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju07g1829 616 PANTHER RUST RESISTANCE KINASE LR10-RELATED 282 593 IPR045874 GO:0004672
Alju07g1829 616 Gene3D Transferase(Phosphotransferase) domain 1 381 585 - -
Alju07g1829 616 FunFam PR5-like receptor kinase 381 586 - -
Alju07g1829 616 ProSitePatterns Protein kinases ATP-binding region signature. 311 333 IPR017441 GO:0005524
Alju07g1829 616 Pfam Wall-associated receptor kinase galacturonan-binding 30 99 IPR025287 GO:0030247
Alju07g1829 616 SUPERFAMILY Protein kinase-like (PK-like) 288 575 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g1829 Alju-ChrAlju07 44569528 44571458 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g1829 271 588 Receptor kinase-like Gene Family AT1G66910 46.154 1.10e-92 298
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Alju07g1829 PK_Tyr_Ser-Thr 5.3e-45 CL0016