Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g1811 ATGAACTACGGCAGGCTCCAACCCTCCCAGCCCGGCGGCTCCTCCCGCAGCTCCGATGACCCCATTCCTCCCGCCGCCTCCCCCCGCAGCAAGAAGAAACTCATCTTCCTCTCCGCACTCGCTCTTGTCCTGATCTTCGCTTCAGCCCTGTCCGCCGTCCTCCTTGTCGGCACCCGACCTCGGTCTTCGCCTCCTCACGATTCCGGCGTCGGCGGCAAGCCTACTCAGGCTATTTCACGCACCTGCGACAAAACTCGGTTCCCTTCCCTCTGCGTTAAGTCCCTCCTCGATTTCCCGGGCTCCGCCGCAGCGTCGGAGCAGGACCTCGTCCACATTTCTCTCAACATGACATTGCAACACCTAAGCAAAGCCCTCTATTCCTCCACCGGCATCTCCACCGTCCAGATGGATCCGCTTGAACGGTCCGCCTACGAGGACTGCCTCGAGCTCCTCGAGGATTCCGTCGATGCGCTCCTCCGCTCCCTCACCTCGGGAGCCGCCGGCGGAGGATCCACCGACGATGTGCTGACGTGGCTCAGCGCGGCACTCACGAATCAAGACACGTGCAGCGAGGGATTCGCGGACACGAGAGGCACAGTGAAATATCAGATGGCAAGTAATTTAAAGGACTTGTCCGAGCTCATTAGCAACTGTCTCGCCATATACGCCGGCAACGATTTCTCAGGGGTTCCGATTCAGAACAGGAGAAGATTAATGGGAGACAATGACAATGGCGACGTCTCAGGCGAATTCCCGGCCTGGTTAAGCAAAAGAGACAGAAGATTGTTGGCCACGCCTGCACCGGCGATTCAAGCTGATATCGTCGTGTCGAAGGACGGAAGCGGAACCGTTGAGACCATCGCGGAGGCGATAAAGAAAGTGCCTGAGCACAGTGGTCGCCGGATTGTTGTGTACGTGAAGGCAGGAAGGTATGAAGAGGAAAATTTGAAGGTTGGGAAGAAGAAAACCAATGTGATGTTCGTAGGTGATGGGAAGGGCAAGACAATCATCACAGGTGGCAGAAATTTTGCTCAAGGCACCACCACCTTCCACACTGCCTCCTTCGCTGCTTCTGGGGCTGGTTTTATTGCAAAGGACATGACAATTGAGAACTATGCGGGGCCCGGGAAGCACCAAGCGGTGGCGCTTCGTGTCGGAGCCGACCATGCGGTGGTGTACCGATGCAGCATCATCGGATACCAAGACACATGTTATGTCCACTCCAACCGTCAGTTCTTCCGGGAATGTGACATTTATGGAACCATTGACTTCATCTTCGGCAACGCCGCCGTGGTTTTCCAGAACTGCAACCTCGTATCTCGAAAGCCCATGGACCAACAGAAGAACACCATAACGGCCCAAAATCGAAAAGACCCGAATCAGAACACCGGTATTTCCATTCATAACTGTCGGATCCAAGCGGCTTCGGATCTGGAGGCAGCCAAGGGACGCATCCCAACCTATCTGGGCCGTCCGTGGAAGATGTACTCTAGAACCGTCTACATGCTATCCTACATGGGCGATCACATCCATCCACGTGGATGGTTGGAGTGGAATGCCACGGCTCCAGTAGACAAATTGTATTATGGAGAGTATATGAATAGTGGGCCGGGTGCAGCTGTTGGAGGCCGGGTCAAATGGCCAGGGTACCGGGTTATAACATCCACGGTGGAGGCGAGTAGATTCACGGTGGCCGAATTCATAGCAGGGTCGTCATGGTTGCCGTCAACAGGGGTGGCATTTGTTGGAGGACTATCTAGCTAA 1764 0.5539 MNYGRLQPSQPGGSSRSSDDPIPPAASPRSKKKLIFLSALALVLIFASALSAVLLVGTRPRSSPPHDSGVGGKPTQAISRTCDKTRFPSLCVKSLLDFPGSAAASEQDLVHISLNMTLQHLSKALYSSTGISTVQMDPLERSAYEDCLELLEDSVDALLRSLTSGAAGGGSTDDVLTWLSAALTNQDTCSEGFADTRGTVKYQMASNLKDLSELISNCLAIYAGNDFSGVPIQNRRRLMGDNDNGDVSGEFPAWLSKRDRRLLATPAPAIQADIVVSKDGSGTVETIAEAIKKVPEHSGRRIVVYVKAGRYEEENLKVGKKKTNVMFVGDGKGKTIITGGRNFAQGTTTFHTASFAASGAGFIAKDMTIENYAGPGKHQAVALRVGADHAVVYRCSIIGYQDTCYVHSNRQFFRECDIYGTIDFIFGNAAVVFQNCNLVSRKPMDQQKNTITAQNRKDPNQNTGISIHNCRIQAASDLEAAKGRIPTYLGRPWKMYSRTVYMLSYMGDHIHPRGWLEWNATAPVDKLYYGEYMNSGPGAAVGGRVKWPGYRVITSTVEASRFTVAEFIAGSSWLPSTGVAFVGGLSS 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g1811 587 Gene3D - 267 585 IPR012334 -
Alju07g1811 587 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 76 222 IPR035513 -
Alju07g1811 587 PANTHER PECTINESTERASE 46 575 - -
Alju07g1811 587 NCBIfam pectinesterase inhibitor domain 52 222 IPR006501 GO:0004857
Alju07g1811 587 FunFam Pectinesterase 74 225 - -
Alju07g1811 587 Pfam Plant invertase/pectin methylesterase inhibitor 77 221 IPR006501 GO:0004857
Alju07g1811 587 Pfam Pectinesterase 273 570 IPR000070 GO:0030599|GO:0042545
Alju07g1811 587 MobiDBLite consensus disorder prediction 1 21 - -
Alju07g1811 587 MobiDBLite consensus disorder prediction 1 26 - -
Alju07g1811 587 FunFam Pectinesterase 267 585 - -
Alju07g1811 587 Gene3D Invertase/pectin methylesterase inhibitor family protein 75 224 IPR035513 -
Alju07g1811 587 SUPERFAMILY Pectin lyase-like 268 584 IPR011050 -
Alju07g1811 587 ProSitePatterns Pectinesterase signature 2. 418 427 IPR033131 -
Alju07g1811 587 CDD PMEI-like_3 82 221 - -
Alju07g1811 587 SMART PMEI_2 73 221 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g1811 Alju-ChrAlju07 44338494 44342175 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g1811 1 586 Carbohydrate Esterase AT5G53370 63.406 0.0 780