Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g1804 ATGGACGAACCTCATGAATTGTTCCAGTCTTCCGGAGGTACTGCCTGGAACTGCAGTGAAGGAGTAGTGGACGAAAGATTGTCCTGTAAGAAACACTACCTCTGCAACGATCGTGGGATGGAAAATCCTTCTGGTGGTACTGGATTGTCGCGGGACGAAAGGGAGTGGAACCGGCCCAAAGTTGAAAGAAATTCTGAAAATGGGCTTGCAGGTTCTGTCAGCGATGGAGTTCAAGATAATGGTGGTCCGAACATCATTCAAGAAACTGCGCGCCCTTTTCTTGGAGTGAAAGGGGAGGGAATGAATCCTGACGTTGAAAAAATGGGCATTGGGTCTCCGGGAGGGGGGGAACAAGTTCAGGTAGGCGAATTTGCGGCTCAAATTCTTCGCGATGGAGGAAAATTTCAAGCCCGGAATAGTGAAGGTGGGAATCAAGATGCTGTTCTAAGTCATCAGGGTGATGCTGATCAACCATGGAGCAGAGAAAGCACCGTCGGAAATGGCGGTGGTGTTGCCGACGCTGGTCAAGAAGAGCACGTGGGTATGGGAAAAGCACATGTTTGTGAAAATGACGCTGTGGGTCCTCCTGTTGCGTGTGAATATGGGAATTTAGGTTGTTTAAAGGAGCTCGGGTCAAAAGAGGAGGGTGGCCATCTCAAAATTTCACAGAAGAAGAGAGTTCTTGATGTTGAAGAGGAACCAGAGCTGCTAAGTGCAGCTAGTAACGAGGAGGGAGATGAAATCTTGAGCCATTGGTTAAAAAGATGTCAGTCAAAGAGTTCCAAGAATAAGAACAAACAGCGTACTGGGGGAGAAACCATGGAGTTGAATGGACAAACTGTTAATGGAGATGAAAGTGCGGATACACATGGGAAAAATAATGTGCTCTCTGTCGAGATCATTGCTAGTGATGTAGGTGCAGGCAGTCTAGAGAATCATTGTCAACCAGAGGTTTTGAAAAGTGGAAAGAAGCGTGGTAAACCGAAGGGTTCAAAAAATAAAATTAAGAGTAATTTGTGTGGTATTGATGCAGATGCAGGTGACATTGAAATGCCAAAGAGTTGTGATAGACCCAAGGAATCTATAAGTGGACGGAAGATTATTCCGTGTCATAGGAATTCTAGTTCAGTTGACCAAGCACTAAAGAAGCGTGGCAGACCAAAGGGCTCAAAAAATAAAATTAAGAGTGGTGCAAGTAATGTTGGTATTGCTGATATTGAAGCACCAAAAAAGCGAGGTCGACCAAAGGGTGCAAAAAATAAAAAGCGGAGTGTTGTCTGTGTTGGTAATGCTGATGTGGATGACATTGTAACACCAAAAAAAAGAGGTCGGCCAAAGGGTTCAAAAAATAGGAAGGGGATGGTTGTATGTGTTAGTAATGAAGGTGCATTTGACATTGGAACACCCAAGAAGCGTGGTAGACCAAGAGGTTTAAAAAAGAAAATGCTGGGTATTGCCTGCGCTAACAATGTAAGTGCAGGTGACATTGAAAACCCAAAGAAGTCTATAGTGAAGTATGGTCAACCACGGAACTCAAGAAACAAGAAGAAAAAATTGGGAGATCAGACAGATGAAGAAGCGTGTGGTGAAGTTATGTTTGTTCATAAGGCATTTGATAAAACTATTGGTCTTACAGGTTTGGGAAGTAATTTAGCCAATATTGTAGGTGAGCAAGATATAGGTTCACTTATTAAAACTGCCGATAGTAAAAATGGAGAGGAGGATCTACAACGAGAGATGAGTGTTCAATCACAAAGGGCTACTCATGTTAGTGATGGGAATGAGGATATGCCTTCAAAGGGCTCTTGTGATGGTGAGGTTCAAAATGAAAACAACCATGTTAACATTAAGCATGATCAACCAAAGGGTAATATTGAAAGAAAAGAGCATTTGACTAGAAAATTTACTGGGGAATCTAATGAGGAAATGTTGGACATTTGCTTGGCCATACCAGAGAATGCAATCATTACCGCTGAATTTGAGGCAGTCAAGGAATTTACTATTGGTAGATGTAGTAAAAGTGCATCTGGAAACAATACTGATAAGGCAGATAATAGGTGGGGCAGGCCGACAAGCTTCAGTGACAAAGAAAAGGAGACTGTCCGGTCTTTTAATTCAGAGATTGAGAGGTGTGACCATATAGCTGAGATAGATGGAAGAACATCTGCTGAAGCTTCTTGTAGAAACGGTATTGATGGGCAACAAGTTAAGCATGGAAAACATAGTTTAAAAAAGAAGAGACTATGTATTGAGCACTACCAATTGAAGAGTTCAAGGGGAAAGGCACCAAATGCAGCTGCGGTGGAAGGTGAGAGTGAATCAGTTGAAGTGAAGTACAAATCTAGGAGGAATGAGAGATCAAATAATAAGAGAGTCCAATCCTTACAAAATGAGAAGAAGATTCTTTCTGGTAGAGTGGTTAAATACTCTAGAGATCCTGGAAATAAAAAGATGAAAACAAAATGGTTAAAATGCGGATCTGGCAGCATTCAGACAAGGTCTAGTGGAAGGCTGAGAAAATTGTCAAACTATATAGTGGAAACTTCTGGCAGCAGCATCCAGAGAAGGTGTAGTGAAAGACTGAGAAAGTTGTCAAACCGTGGATTAGACTCTTCACGTTTGATTGTTGATTCTAGAAGGAAAAAGGGCCTGAGGAGTTTAATGTGCCACCAGTGCTGGAGGAGTGATAGGAGTGGTGTTGTCATTTGTGGCAATTGCAAACGGAAGCGATATTGCTATGAGTGCATAACAAAATGGTATCCAGACAAAACAAGAGAGGAGATAGAATTTTCCTGTCCCTTTTGCCTTGGTAATTGCAATTGTCGGTTGTGTTTGAAGGAGGCTGTATCTGCAGAGACTGCGAGTGTTGAATCAGATACTGATGTCGATTTACAAAAGTTGCTCTACTTGCTTAAGAAAATTCTTCCTTTACTCCAGCATATCCAACAAGAGCAGAGATCAGAAATCGAAATAGAATCTAGCTTGCTTGGTTCACAACTGACAGAAGAAAATATCATGCAGTCACAGATTGATGATGATGATCGAGTGTATTGTGACAACTGTAATACATCCATCGTCAACTTGCACAGAAGTTGTCCTAATCCTAGTTGTAGTTACGATCTCTGTCTCACTTGTTGCATGGAACTAAGAAATGGACTTCATTGTGGAGATATTTCCACTAACAGCAATGAGGGAGGGGCTGATATCTCATCCGAATTGTCTTGGAAAACAAATATAAATGGTTCGATTCCTTGCCCTCCAAAATCAAAAGGAGGCTGTGGTACTACAATTCTCTCATTGAGACGCCTATTTAAAGCTAATTGGGTGGATGAATTGGTTGGGAATGCGGGGGAACTTACCATCAAATATGAGCCCCCTAATGTTGATTCTACTAAAGGATGTTTATTGTGCCATAATTTTAGGATTGATACAGAACAGGATTTTGTCAGGCAAGCGGCTTCCAGAGAAAACTGCCATGATAATTTTTTGTTCTGCCCAAATGCCATGCACATGAGAGATAAAGAATTCAAGCATTTCCAGATGCATTGGATAAGTGGTGAGCCTGTTATAGTCAGGAATGCATTTGAAAAGGCTAGGGGCCTTAGCTGGGATCCAATGGTGATGATGAGGGCTTTTAGGGGGGCCAGGAGGATACTAAAAGAGGAGGCAACTGCGGTTAAAGCCATTGACTGCTTAGATTGGTGCGAGGTTGAAATTAATATCTTCCAGTTCTTCAAGGGCTACCTTGAAGGTCGTAGGTATAAAAATGGGTGGCCTGAGATGTTGAAGCTTAAGGATTGGCCTCCATCAAATGCTTTTGAAGAGTGTTTGCCTAGGCATGGTGCTGAGTTTATTGCTATGCTTCCATTCAGTGACTATACTCATCCCAAATCTGGTATTCTAAATCTCACTACAAAGCTACCTATTGTTTTAAAGCCAGATTTGGGCCCCAAAACATACATTGCATATGGATCTTTAGAAGAGCTCGGCAGAGGTGATTCTGTAACAAAACTGCATTGTGACATCTCAGATGCGGTCAATATATTGACACATACAGCAGAAGTAAAGAGACCACCACGGCTAAGAAAAGCCATAAAAAAAATACAGAAAAAGCATGAAGCTGAAGATATGTGCGCTCTCTATGGCTGGAAGAATGAAGGATTGGATTCTTGCAGGAAAAAACCAAAACGGTGCCGCCTCGATGTAAGCATGGATTCGAAAACCCCTAGAAAAGAAGACATTATCGTGGGAGACTCTAATGTACTTAAAAGTCAGGTATCAGAGGAAGAGAATATGAATGAACAGCGGAATATGTCTGAAGATTTGGGACCCTCAAGAGCATATATGGCAGCTTGCACTCTAAAACACGCAGCTTCTCCCAAAAGTGAAAAAAAAGACTGTGAATGGATGCACGGTGAATTTAAGAATGCTGTCCAAAAATGCTCATTATCATATGATGGACATCATGAAGGAATTTCATCCCCTGAACATATGCTGTCTAAAACATTCACTAAAGACAGTTATGAAAAAGAAAAAACTTCTGGTATGCATGAAACTAATAGGCTTTGTGAATGTAACCTGGCTGATACATGTGCTCTCTACATTGATTTGAATTTGTGCACTCCACCAGCCTCGGTAAACCAGGACAATTTGACAAATTTTACAGAAGAATCTGAATCAAAAGGCTGGTGCATGTGTGCTGAGGAGTCTCCTATTGGAATCATTCCCAACTTTGAGAATGATTGTGACAGTTCCTGTGTGGGGACATGTTCTGAAGTCAAGAATGACAAAATAGAGTCACTTAGAAATGATACGATAACAGAAAAAGCTTTCCTTGAAAATGATGATGTGTCAGACGCCCAATACGGGAGTGCTGTATGGGACATATTTCGTAGGCAAGATGTGCCAAAGCTGACGGAGTACCTGAAGAAACACTGCAGAGAATTCCGTCACATAGATAATCTTCCTGTGAATTCTATAACACATCCAATTCATGACCAGACTCTTTATCTAAACGAAAGACATAAAAAGCAGCTAAAGGAAGAATTTGGCATTGAACCATGGACATTTGAGCAACACCTTGGGGAGGCTGTTTTCATACCTGCAGGGTGCCCGCATCAAGTGAGGAATAGACAGTCTTGCATAAAAGTTGCTCTCGACTTTGTTTCACCTGAAAATGTTCAAGAGTGCGTTCGATTGACGGATGAGTTTCGGCTGCTTCCAAAGAACCATAGATCTAAGGAAGATAAACTGGAGATAAAGAAGATGGCATTATATGCTGCTGACGCTGCTATAACTGAAGCCATGAAATTAATGCAGAGGATATGA 5328 0.4163 MDEPHELFQSSGGTAWNCSEGVVDERLSCKKHYLCNDRGMENPSGGTGLSRDEREWNRPKVERNSENGLAGSVSDGVQDNGGPNIIQETARPFLGVKGEGMNPDVEKMGIGSPGGGEQVQVGEFAAQILRDGGKFQARNSEGGNQDAVLSHQGDADQPWSRESTVGNGGGVADAGQEEHVGMGKAHVCENDAVGPPVACEYGNLGCLKELGSKEEGGHLKISQKKRVLDVEEEPELLSAASNEEGDEILSHWLKRCQSKSSKNKNKQRTGGETMELNGQTVNGDESADTHGKNNVLSVEIIASDVGAGSLENHCQPEVLKSGKKRGKPKGSKNKIKSNLCGIDADAGDIEMPKSCDRPKESISGRKIIPCHRNSSSVDQALKKRGRPKGSKNKIKSGASNVGIADIEAPKKRGRPKGAKNKKRSVVCVGNADVDDIVTPKKRGRPKGSKNRKGMVVCVSNEGAFDIGTPKKRGRPRGLKKKMLGIACANNVSAGDIENPKKSIVKYGQPRNSRNKKKKLGDQTDEEACGEVMFVHKAFDKTIGLTGLGSNLANIVGEQDIGSLIKTADSKNGEEDLQREMSVQSQRATHVSDGNEDMPSKGSCDGEVQNENNHVNIKHDQPKGNIERKEHLTRKFTGESNEEMLDICLAIPENAIITAEFEAVKEFTIGRCSKSASGNNTDKADNRWGRPTSFSDKEKETVRSFNSEIERCDHIAEIDGRTSAEASCRNGIDGQQVKHGKHSLKKKRLCIEHYQLKSSRGKAPNAAAVEGESESVEVKYKSRRNERSNNKRVQSLQNEKKILSGRVVKYSRDPGNKKMKTKWLKCGSGSIQTRSSGRLRKLSNYIVETSGSSIQRRCSERLRKLSNRGLDSSRLIVDSRRKKGLRSLMCHQCWRSDRSGVVICGNCKRKRYCYECITKWYPDKTREEIEFSCPFCLGNCNCRLCLKEAVSAETASVESDTDVDLQKLLYLLKKILPLLQHIQQEQRSEIEIESSLLGSQLTEENIMQSQIDDDDRVYCDNCNTSIVNLHRSCPNPSCSYDLCLTCCMELRNGLHCGDISTNSNEGGADISSELSWKTNINGSIPCPPKSKGGCGTTILSLRRLFKANWVDELVGNAGELTIKYEPPNVDSTKGCLLCHNFRIDTEQDFVRQAASRENCHDNFLFCPNAMHMRDKEFKHFQMHWISGEPVIVRNAFEKARGLSWDPMVMMRAFRGARRILKEEATAVKAIDCLDWCEVEINIFQFFKGYLEGRRYKNGWPEMLKLKDWPPSNAFEECLPRHGAEFIAMLPFSDYTHPKSGILNLTTKLPIVLKPDLGPKTYIAYGSLEELGRGDSVTKLHCDISDAVNILTHTAEVKRPPRLRKAIKKIQKKHEAEDMCALYGWKNEGLDSCRKKPKRCRLDVSMDSKTPRKEDIIVGDSNVLKSQVSEEENMNEQRNMSEDLGPSRAYMAACTLKHAASPKSEKKDCEWMHGEFKNAVQKCSLSYDGHHEGISSPEHMLSKTFTKDSYEKEKTSGMHETNRLCECNLADTCALYIDLNLCTPPASVNQDNLTNFTEESESKGWCMCAEESPIGIIPNFENDCDSSCVGTCSEVKNDKIESLRNDTITEKAFLENDDVSDAQYGSAVWDIFRRQDVPKLTEYLKKHCREFRHIDNLPVNSITHPIHDQTLYLNERHKKQLKEEFGIEPWTFEQHLGEAVFIPAGCPHQVRNRQSCIKVALDFVSPENVQECVRLTDEFRLLPKNHRSKEDKLEIKKMALYAADAAITEAMKLMQRI 1775
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g1804 1775 MobiDBLite consensus disorder prediction 673 687 - -
Alju07g1804 1775 ProSiteProfiles Zinc finger RING-type profile. 889 935 IPR001841 -
Alju07g1804 1775 MobiDBLite consensus disorder prediction 138 164 - -
Alju07g1804 1775 ProSiteProfiles JmjC domain profile. 1296 1738 IPR003347 -
Alju07g1804 1775 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 527 1772 IPR045109 GO:0032454|GO:0033169
Alju07g1804 1775 SMART cupin_9 1277 1738 IPR003347 -
Alju07g1804 1775 MobiDBLite consensus disorder prediction 270 289 - -
Alju07g1804 1775 Gene3D Cupin 1158 1521 - -
Alju07g1804 1775 Gene3D Cupin 1581 1747 - -
Alju07g1804 1775 Pfam JmjC domain, hydroxylase 1621 1721 IPR003347 -
Alju07g1804 1775 MobiDBLite consensus disorder prediction 673 696 - -
Alju07g1804 1775 SUPERFAMILY Clavaminate synthase-like 1173 1762 - -
Alju07g1804 1775 FunFam Transcription factor jumonji (JmjC) domain-containing protein 1559 1747 - -
Alju07g1804 1775 Pfam Zinc-finger domain of monoamine-oxidase A repressor R1 886 956 IPR018866 -
Alju07g1804 1775 MobiDBLite consensus disorder prediction 351 366 - -
Alju07g1804 1775 MobiDBLite consensus disorder prediction 67 81 - -
Alju07g1804 1775 MobiDBLite consensus disorder prediction 351 425 - -
Alju07g1804 1775 MobiDBLite consensus disorder prediction 135 175 - -
Alju07g1804 1775 MobiDBLite consensus disorder prediction 34 81 - -
Alju07g1804 1775 MobiDBLite consensus disorder prediction 257 289 - -
Alju07g1804 1775 MobiDBLite consensus disorder prediction 316 336 - -
Alju07g1804 1775 SMART AT_hook_2 381 393 IPR017956 GO:0003677
Alju07g1804 1775 SMART AT_hook_2 469 481 IPR017956 GO:0003677
Alju07g1804 1775 SMART AT_hook_2 439 451 IPR017956 GO:0003677
Alju07g1804 1775 SMART AT_hook_2 409 421 IPR017956 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g1804 Alju-ChrAlju07 44278018 44287080 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Alju07g1804 JmjC 3.4e-16 CL0029