LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Alju07g1789	ATGGAATATCTTACTCACCACCAGTCACATCACCTTTTCTCTCCCATAGATATGGACTTCGACCTCACTGAATTTGATTTACCAAACATCAATTATCTACTTAGCTTCTACTCCCGTAACCCTACCTGGCAACAAGAAATATTATGGGAGATGTCACCTGTGATGGGTTTAGGTGGCATGGACCTTATGGTCCCACCACCGCCATATGAAAGCAACCCACTTTCTAACTTCAACCCGTTCTCTGAACTTGAAAATTTCGTCTCCGATTTCTCTGGTTTTGATTACAACAATTTCTCTTCTTTATATGATGATGTTGTGATCGACGAAAAGCCTTGTACTATTGCTCTGCCCAATCACTCTCAGCGCGAGGCTTTTCCGATTCAAATGGGTCAATCTTCGAGCTCTATGTTCATTGGAGGCGGGTATAGTAACCCTTCCATTAAAGAAGATGGTGATCATGAGACCAGGGACAGGATTTGCTATAACAAAAAGAAAAGATCATCCAATTTAGAATTAGACGATATAAGGAAGCATTTTGATGTTCCCATAACACAAGCTGCAAAACAACTGAACGTGGGACTGACCCTGCTTAAGCGAAGATGCAGAGAGCTCAATATTTCAAGGTGGCCTCATCGGAAAATCAAGAGCTTGAAGACACTCATCGACAATGTCAAGGAACTGGGTTTGGCAGAGGAGGTGGCTATGCTGGAGAATCACAAGAAGCTTATGGAGAAGTTGCCTGATGTGGAACTGAGTGAGCAAACTAAGAAGCTTAGGCAAGCTTGTTTCAAAGCCAATTACAAAAGGAGAAGATTCTTGGCACTTCAAATCCAGGCCTGA	840	0.4262	MEYLTHHQSHHLFSPIDMDFDLTEFDLPNINYLLSFYSRNPTWQQEILWEMSPVMGLGGMDLMVPPPPYESNPLSNFNPFSELENFVSDFSGFDYNNFSSLYDDVVIDEKPCTIALPNHSQREAFPIQMGQSSSSMFIGGGYSNPSIKEDGDHETRDRICYNKKKRSSNLELDDIRKHFDVPITQAAKQLNVGLTLLKRRCRELNISRWPHRKIKSLKTLIDNVKELGLAEEVAMLENHKKLMEKLPDVELSEQTKKLRQACFKANYKRRRFLALQIQA	279

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Alju07g1789	279	ProSiteProfiles	RWP-RK domain profile.	157	238	IPR003035	-
	Alju07g1789	279	PANTHER	PROTEIN RKD4	128	274	IPR044607	GO:0003700
	Alju07g1789	279	Pfam	RWP-RK domain	169	217	IPR003035	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Alju07g1789	Alju-ChrAlju07	44137192	44138350	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Alju07g1789	170	274	AtRKD Transcription Factor Family	AT5G53040	64.762	9.80e-43	145

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	RWP-RK	Alju07g1789		RWP-RK	4e-23	No_clan