Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g1747 ATGATGGAGGTTGATGAAGAGTATATTCAAGGATCAGAAGAAAGCTTCATCAGCTGCTCAGAGCCACCACCTCAGAATCCAAGGAAGAAGAACAAAGTGGTGAACAAGAAGAGGTTTAGTGATGAACAAATCAGATCATTGGAGTGCATATTTGAATCAGAGTCCAAGTTAGAACCAAGGAAGAAGATCCAAGTAGCAAGAGATCTGGGGTTGCAGCCTCGCCAAGTAGCCATATGGTTTCAGAACAGAAGAGCAAGAGGGAAATCCAAATGGATAGAGCAAGAGTACAGGAAGCTCAGAGATGAGTATGACAATTTAGTGTCCAGGTTTGAGTCCCTCAAGGAAGATAAGGAGTCCTTGCAAGCAGAGTTGCAGAATCTGCATGATCTGATGGAGACATCTAAGAATGATGAAGGGAAAAAGAGTAAAGATTGTAGGAGTAGTGAAGTAAAGCCAAGTTCTTCTTATGAGGGTTTGGATGAGGTCAGAGACAGAGGAGGCATGCATTTACAAGATCAAAGTGAAATGATGAGCAAGAATAAGAATGGGTATTGTGAGGATACAGAATACCAACTTCTGAGAATGGACGAGCTTGAAAAATGGTACAGTAGTGGGGATCCAAGTGGCCTCTTAGATCAACCTTGTAGTTCACAATGGTTGGATTTCTGGACTTGA 675 0.4222 MMEVDEEYIQGSEESFISCSEPPPQNPRKKNKVVNKKRFSDEQIRSLECIFESESKLEPRKKIQVARDLGLQPRQVAIWFQNRRARGKSKWIEQEYRKLRDEYDNLVSRFESLKEDKESLQAELQNLHDLMETSKNDEGKKSKDCRSSEVKPSSSYEGLDEVRDRGGMHLQDQSEMMSKNKNGYCEDTEYQLLRMDELEKWYSSGDPSGLLDQPCSSQWLDFWT 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g1747 224 ProSiteProfiles 'Homeobox' domain profile. 30 90 IPR001356 GO:0003677
Alju07g1747 224 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 29 172 IPR045224 GO:0003700
Alju07g1747 224 MobiDBLite consensus disorder prediction 1 34 - -
Alju07g1747 224 PRINTS Lambda-repressor HTH signature 61 70 IPR000047 GO:0003677
Alju07g1747 224 PRINTS Lambda-repressor HTH signature 70 86 IPR000047 GO:0003677
Alju07g1747 224 SUPERFAMILY Homeodomain-like 18 89 IPR009057 -
Alju07g1747 224 MobiDBLite consensus disorder prediction 131 164 - -
Alju07g1747 224 SMART HOX_1 28 94 IPR001356 GO:0003677
Alju07g1747 224 FunFam Homeobox-leucine zipper protein ATHB-7 14 90 - -
Alju07g1747 224 Pfam Homeobox associated leucine zipper 91 131 IPR003106 GO:0006355|GO:0043565
Alju07g1747 224 Gene3D - 18 94 - -
Alju07g1747 224 ProSitePatterns 'Homeobox' domain signature. 65 88 IPR017970 GO:0000981|GO:0006355
Alju07g1747 224 Pfam Homeodomain 36 88 IPR001356 GO:0003677
Alju07g1747 224 CDD homeodomain 39 91 IPR001356 GO:0003677
Alju07g1747 224 Coils Coil 96 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g1747 Alju-ChrAlju07 43711120 43711900 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g1747 38 197 Homeobox Transcription Factor Family AT3G61890 48.214 7.99e-39 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Alju07g1747 Homeodomain 1.1e-15 CL0123