Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g1733 ATGTCACAGCAGAAGCAGAATAATAATAATAGGGTGATGGTGATGAGTGGAAGCAATGCAAAACAAGTTGGCGACACAACTTATACAAAGATCTTCGTGGGAGGCTTAGCTTGGGAGACAAAAAGAGACTCTCTCAGACGCTATTTTGAGCAGTTTGGAGAAATCTCAGAGGCTGTTGTTATCACTGACAGAAACACTGGAGCATCCAAAGGCTATGGCTTTGTGACTTTTAAGGATCCTGAATCTGCAATGAGAGCTTGTCAGAATCCCTATCCTTTGATCGATGCGAGGAGGGCTAATTGTAATCTTGCAGTTCTTGGTGCTCGCAAATTCAACCCATCATCCACCACAGGAGGAGCTGAGAAATTTAACACCAATTCATGGGCTATGGTACCAGTCCCAGTTCAAGGTTCTTCATATTACAATCAGCACATACCCCATTACACTTTTCCCTTTCCACCGCCCTATAGGTATCCTCCTGCTTATCCTCCCTCACAAGAAATCTATGCAATGAACTACTATAATGTTTATGGAGGGAATCAGGTTCCATTTCGATGGCGTCCAGCACTATACCAACCATTTTATGGGCAGAGTAATTCAATGAGATTGCCAGCAGAAGCACCAATAATGGGGAAGAAGACACACTACTCTGATATCCCACCAGAACCTATTTCAGTTTCTCCTTCAATACCCACCTCTGGACTAGTCACAGGGACAGTTTCTTCTGCTGCAGCAGCCAAGGTTGGAGCATCATCCCCTGAACACAAATCTTCAGCTTAA 780 0.441 MSQQKQNNNNRVMVMSGSNAKQVGDTTYTKIFVGGLAWETKRDSLRRYFEQFGEISEAVVITDRNTGASKGYGFVTFKDPESAMRACQNPYPLIDARRANCNLAVLGARKFNPSSTTGGAEKFNTNSWAMVPVPVQGSSYYNQHIPHYTFPFPPPYRYPPAYPPSQEIYAMNYYNVYGGNQVPFRWRPALYQPFYGQSNSMRLPAEAPIMGKKTHYSDIPPEPISVSPSIPTSGLVTGTVSSAAAAKVGASSPEHKSSA 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g1733 259 PANTHER BOULE-RELATED 13 216 - -
Alju07g1733 259 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 29 110 IPR000504 GO:0003723
Alju07g1733 259 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 31 88 IPR000504 GO:0003723
Alju07g1733 259 CDD RRM_RBM24_RBM38_like 29 104 - -
Alju07g1733 259 Gene3D - 1 121 IPR012677 -
Alju07g1733 259 SMART rrm1_1 30 102 IPR000504 GO:0003723
Alju07g1733 259 SUPERFAMILY RNA-binding domain, RBD 28 116 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g1733 Alju-ChrAlju07 43529829 43531038 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g1733 25 104 C2H2 Transcription Factor Family AT2G19380 42.500 4.07e-15 72.8