Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g1721 ATGGGCGAGGTCGTGTTGAGTACTGAGAAGGTTCTGGAACCGACGGAGGTAGAGGACGAGAACCATAAGCAGAAGGTGACGGCGGAGGAGGAAGAGAGTGGAACAGAGAGTAAGGATGAGGAATTGAATAATGGATTGATGCGGTGGAAGAATTTCTTGCCCAAAATGACATTGAGGGTGTTGTTGGCTGAAGCTGATGATTCTACACGGCAGATTATAGCTGCGCTTCTCAGGAAATGCAGCTACAGAGTGGCTGCTGTTGCTGATGGCTTGAAGGCATGGGAAATACTGAAGAGAAGACCACACAATGTTGATCTCATATTAACAGAAGTAGATTTGCCATCAATATCTGGTTATAGTCTTCTCACATTAATTACGGAGCATGAAGTTTGCAAGAACATTCCTGTTATAATGATGTCTTCGAAAGATTCAATCAACACAGTCTACAAATGCATGTTGAGAGGTGCAGCTGACTACCTTGTTAAGCCCCTTAGAAAAAACGAGCTGAGGAATTTGTGGCAGCATGTTTGGAGAAGACAATCTTCAACCTCTGGTGTAAATGGTCTTGAAGACGAGAGTGTTGCACAACCGAAGGCTGAAGCCACTGCCGAAAACAATGCTCCAGATAATCATTCAAGTGGTGATGTTGCATGCATTCAAAGAAATAAGGAATTAATTGAGAAAGGAAGTGATGCTCAGAGCTCTTGTGGTGCAAAACCTGATTTGGAAGCTGAGAGTGCTCCGGCGGATCATGTGTACGAATCTTCCCAACTAAAGCATGTCAAACCATACCCAAGAGAAACAAAGATGCAGGAGGTAGAAATGTCTATTCAAGTAGGCCAGACTGTGACTGTGCATGACAATCACCCCGGAGGATTAACAGTTGAGATCCGAAAAAATGGTGGTGAGGCTAATTCAGCATATGGCAAGGATGGTGACCAAGAACATTTTAGGACTCCTGACACCTATGACAACCACAATGTTCAAATTACCTCTTCAAAGGAAGCTATCGACTTGATTGGAGCATTTCAAAATCATCCAAACAGCAGTCACAGAAGTTCCTCAGTCAACTGCACGGGCACATTTGACTTTTCTCCTCAGCTGGATCTTTCCTTGAGAAGATCTCATCCCAGCAGCTTTGAGGATGAAACTACTAAAGAAAGGCATGCCCTGATGCATTCTAGTGGCTCGGCCTTCAGGCGGTATACAAATAGGCAAACACAAGCACCGCCTGCAGAGTCCATAAACTGCTGCAATCAACAAAGAGAAAAGAGAACAAATTGTGAGAACAATATCTCAAACATTGTAGGCTATAACTCAGACATTTCAATGCCTAATTTGCAGTCGAAAGAATCTGAGCTCACAACTTCACCCTCCCAGTGTAGACTTTCACATCCAATCCCAGTAAAAGCTGTAAGGTACGATAATCCATGCCCAGCCTATGGTTCTGCACTTCCTCCTATGTTCCGTACACAATTTGGCCCCGCATCAACAACACTAAATCCAGACTCAATTCCACACCGTGAACCAACCTTTCAAGTGAATGGTTTTTATCAGTCAAATACCAGAGAAAGCAGTTCAGAGCAGCCTTATGAACCTCAAGCTCAAAATGGAAACAACACAACAAACCACATTGTGTTCATACAGGAAGGCAATTTGGAACATGTGGAGGATCGAAGAAGGCACATCTCTCCCACGACTGGTCAAAGTGCTTGCACTAACAGCAATGCTGACCAGGTTGCTATAGCCAGGGCAGCTTCAGATAGCATGACTGAAGACCTCACAAATAATACAAGTTCTCATCGATCTATCCAAAGAGAAGCAGCTCTAAACAAATTCCGCTTGAAACGGAAAGAGAGATGCTTTGAAAAGAAGGTTCGGTATGAAAGCAGAAAGAAACTTGCAGAGCAGCGCCCTAGAGTGAAGGGACAATTTGTTCGTCAAGTACAGCAAGATTCCCATGTTTAG 1968 0.439 MGEVVLSTEKVLEPTEVEDENHKQKVTAEEEESGTESKDEELNNGLMRWKNFLPKMTLRVLLAEADDSTRQIIAALLRKCSYRVAAVADGLKAWEILKRRPHNVDLILTEVDLPSISGYSLLTLITEHEVCKNIPVIMMSSKDSINTVYKCMLRGAADYLVKPLRKNELRNLWQHVWRRQSSTSGVNGLEDESVAQPKAEATAENNAPDNHSSGDVACIQRNKELIEKGSDAQSSCGAKPDLEAESAPADHVYESSQLKHVKPYPRETKMQEVEMSIQVGQTVTVHDNHPGGLTVEIRKNGGEANSAYGKDGDQEHFRTPDTYDNHNVQITSSKEAIDLIGAFQNHPNSSHRSSSVNCTGTFDFSPQLDLSLRRSHPSSFEDETTKERHALMHSSGSAFRRYTNRQTQAPPAESINCCNQQREKRTNCENNISNIVGYNSDISMPNLQSKESELTTSPSQCRLSHPIPVKAVRYDNPCPAYGSALPPMFRTQFGPASTTLNPDSIPHREPTFQVNGFYQSNTRESSSEQPYEPQAQNGNNTTNHIVFIQEGNLEHVEDRRRHISPTTGQSACTNSNADQVAIARAASDSMTEDLTNNTSSHRSIQREAALNKFRLKRKERCFEKKVRYESRKKLAEQRPRVKGQFVRQVQQDSHV 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g1721 655 Gene3D - 56 273 - -
Alju07g1721 655 ProSiteProfiles Response regulatory domain profile. 59 177 IPR001789 GO:0000160
Alju07g1721 655 SMART REC_2 58 173 IPR001789 GO:0000160
Alju07g1721 655 Pfam Response regulator receiver domain 60 171 IPR001789 GO:0000160
Alju07g1721 655 MobiDBLite consensus disorder prediction 1 41 - -
Alju07g1721 655 Pfam CCT motif 606 648 IPR010402 GO:0005515
Alju07g1721 655 MobiDBLite consensus disorder prediction 12 41 - -
Alju07g1721 655 MobiDBLite consensus disorder prediction 184 215 - -
Alju07g1721 655 CDD psREC_PRR 60 163 - -
Alju07g1721 655 PANTHER TWO-COMPONENT RESPONSE REGULATOR 58 337 IPR045279 GO:0009736
Alju07g1721 655 MobiDBLite consensus disorder prediction 632 655 - -
Alju07g1721 655 MobiDBLite consensus disorder prediction 199 215 - -
Alju07g1721 655 ProSiteProfiles CCT domain profile. 606 648 IPR010402 GO:0005515
Alju07g1721 655 SUPERFAMILY CheY-like 51 184 IPR011006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g1721 Alju-ChrAlju07 43463692 43467620 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g1721 44 650 Response Regulator Gene Family AT5G24470 40.160 1.18e-126 384
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Alju07g1721 Response_reg 6.2e-21 CL0304