Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g1675 ATGGGAACATCAGGGCTTGATGATGCAGATCAAAGCTCCATTTCTTCATCATCGTCTTCAGCTGGAGTTGTAAATACGACCGAAGGTTACAACACTGCCAGTACTGGAATTACGACTGAAGGTAACAACACTGCCAGTACGGGAATTGGAACGTGGTATGGGGTGCGGTTGCCTTCTCCACTCTCTTTTTTACTGGATTACTCTGGCCGTCTCCGCTCAAGGTCGTCAGTCGGCTATTCTGAGCCTGTAATAAACGACAACGAAGCTATGGCTTATGAAATACGACATGACCGTCAAACTTCTTCCTTAGATTCTACTGCTGTAACCATTTGCAGTGGTCGCAGTGACAGCAGTTCAGGGGAAGTTGCCATACGAATTAGTGGAGCAGTCGGACGGAATCACAATGCTGGGTTGGGTTCGGTTTCTTCAGCGTTCGTAAACCAGTCTGTAGACGATGATTTGATGGTAAGTAAAAATGGAATGCCGGTTCCAGATGAGGATGCTGAGGGGAGCAGTGGGATTGTGGCTAGTGAGAGAGCTCCTCTGGCGTCCCCATCATCGTCTCAGGCTAGTAATATTAGTGGGCAGGGCGATGTTGGTGCTGTGAATGGCTTGGACAGTAACATTCGGGGTTTATCGTCTCACGAAAGTAATGATTTTCAGCATCTTGCTAAATGGCTTGAGCAGGTTCTTCCTTTCTCGCTGTTGTTGTTGGTTGTGTTCATTCGCCAGCATTTGCCAGGTTTCTTTGTTACAATTTGGGTTTCAATTGTGATGTTCAAGTCAAATGAAATGGTTAAGAAGCAGACAGCTCTAAAGGGAGATAGGAAAGTCTCGGTTCTCCTCAGTATCTCACTTGTCTTCTTGCTTCATGTGATGTGCATTTACTGGTGGAGTCAAGATGATGATATTTTATACTCACCACTCATCTTGCTTCCTCCAAAAGCAACGCCTCATTTCTGGCATGCAATATTCGTCGTTCTGATTAATGACGTACTTGTGCGGCAAGCAGCAATGTCTTTCAAGTGCTTGCTACTTATATATTTCAAAAATGACAGAGGTCACAGCTTCCGTCTGCAGGCTCAAATATTAACTCTGGTCGAGCACACACTACTGCTGTACCGTACCTTGTTACCAACACCTGTTTGGTACCGATTTTTCCTGAACAGGGAATACGGAAGTCTCTTTTCATCGCTGACCACAGGGTTGTACCTAACCTTTAAGCTAACATCTGCTGTTGAGAAGGTTCAATGCTTCTTTTCTGCCTTAAAAGCATTATGGGGCAAGGATATTCTCTATGGCGTTTATGCTACAAAGGAACAGGTAAATGCTGCAGGTGACCTTTGTGCTATATGCCAGGAGAAGATGTGCGGTCCTATCCTGTTGCGCTGTAAACACATTTTCTGTGAGGAGTGTGTGTCAGAATGGTTTGACAGAGAAAGAACTTGCCCACTATGTAGGGCATTGGTGAAGGCTGGTGATATTCGGTCTTTTGGGGATGGATCAACAAGTCTGTTTTTCCAGCTATGTTAA 1533 0.4514 MGTSGLDDADQSSISSSSSSAGVVNTTEGYNTASTGITTEGNNTASTGIGTWYGVRLPSPLSFLLDYSGRLRSRSSVGYSEPVINDNEAMAYEIRHDRQTSSLDSTAVTICSGRSDSSSGEVAIRISGAVGRNHNAGLGSVSSAFVNQSVDDDLMVSKNGMPVPDEDAEGSSGIVASERAPLASPSSSQASNISGQGDVGAVNGLDSNIRGLSSHESNDFQHLAKWLEQVLPFSLLLLVVFIRQHLPGFFVTIWVSIVMFKSNEMVKKQTALKGDRKVSVLLSISLVFLLHVMCIYWWSQDDDILYSPLILLPPKATPHFWHAIFVVLINDVLVRQAAMSFKCLLLIYFKNDRGHSFRLQAQILTLVEHTLLLYRTLLPTPVWYRFFLNREYGSLFSSLTTGLYLTFKLTSAVEKVQCFFSALKALWGKDILYGVYATKEQVNAAGDLCAICQEKMCGPILLRCKHIFCEECVSEWFDRERTCPLCRALVKAGDIRSFGDGSTSLFFQLC 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g1675 510 ProSiteProfiles Zinc finger RING-type profile. 449 487 IPR001841 -
Alju07g1675 510 PANTHER UNCHARACTERIZED RING FINGER-CONTAINING PROTEIN 25 509 IPR044235 GO:0061630|GO:1904294
Alju07g1675 510 SMART ring_2 449 486 IPR001841 -
Alju07g1675 510 ProSitePatterns Zinc finger RING-type signature. 464 473 IPR017907 -
Alju07g1675 510 CDD RING-HC_RNFT1-like 447 487 - -
Alju07g1675 510 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 434 496 IPR013083 -
Alju07g1675 510 SUPERFAMILY RING/U-box 443 491 - -
Alju07g1675 510 Pfam Zinc finger, C3HC4 type (RING finger) 447 490 - -
Alju07g1675 510 MobiDBLite consensus disorder prediction 1 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g1675 Alju-ChrAlju07 42970445 42974840 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g1675 59 509 C3H Transcription Factor Family AT5G01960 54.525 6.08e-170 484