LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Alju07g1659	ATGGACGAGGATGTTACTAGTTTGATTCAGAGGGCTTGTGAGTTAGCCAGAAATCTTGAATCGAACTTATCCAATATCAGCGAATCTTCTGCTGAATCGGCGGTGAGGTGTATTGATGAGATCGTGACGAAACTTAATGCTGCTAAAGGGAAGCTGTTGCCGGTGCCAGTGGTGTCGCAGCCTCGTGACGACGAAGCAAATAAGCAGGAAATCATACAGCAGCCTCATCAAATAATGGCTTCTTCGTTATTGCAACAATGGCTATCTGGGGGTCATAATCAGTTTGTCCAAATGCCGCAGCTTCAAGCTCCGTCGAGGACGACGTCGTCACCGCCTGGGGCTACCCTGCAGGTCATGACTGACTTGATGGGTGCGAGCAGAGATGTAGATGCTTCTGCAGAAGTTGATGTTGAAGCATCTCCTTCTTCTCGACGCCGTAGAAGCAACATCAGGAAGGATGAAGGAGAAAAGAGGACAATGATGGTTCCAGCAGTTCAGTTTGGGAACACAGATGTGCCACCAGAGGATGGCTATACTTGGAGAAAATATGGCCAAAAAGAGATCCTAGGCTCTAATTTCCCCAGGAGTTACTTCAGGTGCACCCACCAGAAATTATATCAATGCCCAGCGAAGAAACAAGTGCAGCGTTTGGATAATAACCCTAACATATTTGCAGTAACATATAGAGGTGGCCACACGTGCCACATGTCCTCCACAGCTCCATCCTCGTCAGTTCCACCACAACTAATGATCTCACAAGTACAGCCACAAGACATCACACACATTAGTGCCACCACCACCACTTCCTCCCAATTGTCTCCTCCTTCGACTTCAATTCCTTGTTGGCTGTCTCCTGTCCACCTCGGCCTCCTTGCTGGTGGCGGCGGCAGCGGCAGTGGTGGCGTGAATCCGGCCGGGGAAGAGTCTGGCGGTGGCGGTGTGGGCCCCTCCACGTCGAGGTTTGGAGGTGCTGATTACCCGGTGGCAGATATGGCTGATGCCATGTTTAATTCAGGTTCTAGCAGTGGTAATAGCATGGAGTCTCTCTTCGCTTCCGCTGATGACAAATGGGAAGCAGGAGACAACAAGAAAAGCTAA	1098	0.5009	MDEDVTSLIQRACELARNLESNLSNISESSAESAVRCIDEIVTKLNAAKGKLLPVPVVSQPRDDEANKQEIIQQPHQIMASSLLQQWLSGGHNQFVQMPQLQAPSRTTSSPPGATLQVMTDLMGASRDVDASAEVDVEASPSSRRRRSNIRKDEGEKRTMMVPAVQFGNTDVPPEDGYTWRKYGQKEILGSNFPRSYFRCTHQKLYQCPAKKQVQRLDNNPNIFAVTYRGGHTCHMSSTAPSSSVPPQLMISQVQPQDITHISATTTTSSQLSPPSTSIPCWLSPVHLGLLAGGGGSGSGGVNPAGEESGGGGVGPSTSRFGGADYPVADMADAMFNSGSSSGNSMESLFASADDKWEAGDNKKS	365

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Alju07g1659	365	ProSiteProfiles	WRKY domain profile.	175	237	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Alju07g1659	365	MobiDBLite	consensus disorder prediction	295	324	-	-
	Alju07g1659	365	MobiDBLite	consensus disorder prediction	129	157	-	-
	Alju07g1659	365	PANTHER	WRKY TRANSCRIPTION FACTOR 21-RELATED	9	252	IPR044810	GO:0003700
	Alju07g1659	365	SUPERFAMILY	WRKY DNA-binding domain	171	236	IPR036576	GO:0003700\|GO:0006355\|GO:0043565
	Alju07g1659	365	Gene3D	WRKY domain	160	237	IPR036576	GO:0003700\|GO:0006355\|GO:0043565
	Alju07g1659	365	MobiDBLite	consensus disorder prediction	131	157	-	-
	Alju07g1659	365	Pfam	WRKY DNA -binding domain	175	234	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Alju07g1659	365	SMART	WRKY_cls	174	236	IPR003657	GO:0003700\|GO:0006355\|GO:0043565

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Alju07g1659	Alju-ChrAlju07	42822806	42825355	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Alju07g1659	3	254	WRKY Transcription Factor Family	AT2G40740	41.825	1.81e-53	177

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	WRKY	Alju07g1659		WRKY	1.4e-26	CL0274