Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g1656 ATGGCTTCTTCCTCTTCCTCCTCTTCCTCACCAAATTGGGTCATGGAAAATAATGGAGTCATGCCCCATGTTTTAGCTGTTGATGACAACCTCATTGACCGCAAACTCGTTGAGAAGCTCCTCAAGAATTCTTCTTGCAAAGTGACAACTGCAGAAAATGGACCAAGGGCATTGGAGTTGCTGGGGTTGGCAAGTGATGAAGAAAACACCTTGAAGGGAACTGGATCCAAAGTGAATATGATTATCACAGACTATTGTATGCCTGGGATGACAGGATATGAGCTACTCAAGAAAATAAAGAAATCATCTATCATGAAGGAGGTTCCAGTGGTGATCATGTCATCTGAGAACATCCCAACTAGGGTGAACAAGTGTTTGGAGGAAGGTGCTCAGATGTTCATCCAAAAGCCCCTCAAACAATCTGATGTAAAGAAGCTGACATGTCAACTGATGAATTGCAGAGGCTAG 468 0.4338 MASSSSSSSSPNWVMENNGVMPHVLAVDDNLIDRKLVEKLLKNSSCKVTTAENGPRALELLGLASDEENTLKGTGSKVNMIITDYCMPGMTGYELLKKIKKSSIMKEVPVVIMSSENIPTRVNKCLEEGAQMFIQKPLKQSDVKKLTCQLMNCRG 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g1656 155 ProSiteProfiles Response regulatory domain profile. 23 151 IPR001789 GO:0000160
Alju07g1656 155 CDD REC_typeA_ARR 24 146 - -
Alju07g1656 155 Gene3D - 20 153 - -
Alju07g1656 155 PANTHER TWO-COMPONENT RESPONSE REGULATOR 22 150 IPR045279 GO:0009736
Alju07g1656 155 Pfam Response regulator receiver domain 24 145 IPR001789 GO:0000160
Alju07g1656 155 SMART REC_2 22 147 IPR001789 GO:0000160
Alju07g1656 155 FunFam Two-component response regulator ORR5 22 153 - -
Alju07g1656 155 SUPERFAMILY CheY-like 21 151 IPR011006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g1656 Alju-ChrAlju07 42802193 42803077 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g1656 23 154 Response Regulator Gene Family AT3G56380 73.684 3.81e-66 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Alju07g1656 Response_reg 1.4e-22 CL0304