Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g1650 ATGTCGTCGGAGGAAATTGGTCTTGCTTCAGATCAGAGGATCGATAACGGTCTTAATTCACCACTAGTGTTCCAAGAAGACCCCTTGCGTTACAGCTGCGGTGCTCCACAACGTCGGGTCGGGGACCAAGGTTCGAAAACTAGGGAGCTAGGCGGTTTCATTGATGAAAAGATGTTCGCTGTGGACCGTGACCGTTTTTTCGCGACTCAGGGATTGGAATTCCGTCGTAATGTTTTCGGGGATTGCTTGGACCAGCGGAACCCACCGGAAGCCCGGAATTGGAATGGGAACGGGAGCACTGCAACCCCGAGCGGCGATGAATCGGACGGCGAGGATGATGAAGACGATGAGGAAGATGACGACGACGACGATGTTGAGGGCGGCGCTGAAGTGGAAAGACTAGTTGGTGTTAACGATGCTAGCAAAGGAAATTCCAATCCCAATTCAATTAACGATATTAACATTAACAGCATAAGTGGTGGTAACCTTGCTAATGCTGCAGATGGTATATCGAACGGAAAAGCTCAACATCATTCGTCATACGGATCGAGTAGAGAGGTATTGGGGAAGGATGGAGAAATTGGGCCGACGCAGAATAATTCAGGGGGTAACGACGAAGATCATCAGCAAGAAAGGTTAGATAAATCGCAGAGTGCGGTCACAATTGCCGAAACTGATTGTGAGGAGTATTATTCACACTATCTTCAAGGCACGGAGGGCTCAGCTTCTGTGCAGAAAGCTATAGCAGGGGAAAATGATTGCGGATTTAGCGGAAGAAAGGATGTTATCTTTTCAAGCGAGTCAGTCGAATCATTGAGGGCGGTTCTTTCAGATCCTATAACGGGAGCTCTTATGGATGATGCAATGATATTGCCTTGTGGACATTCCTTCGGTGGAGGAGGAATACAGCATGTTATTAGAATGAAAGCTTGTTCCACTTGTTCCCAACCCATATCTGAGGAATCGATATCTCCAAATCTATCGCTTAGAGTTGCTGTGCAGGCATACCGTAGGGAAGAGGAGTCACAGTTTTACCGGTCATCAAAAAGAAGAAGGGAAAGATTTGATCAGGGTGGTTATGGTGATTCAACAGTTATGGAACAACCAAGATGCAGAGGTGTTCAATTTCCATTTGCTGTGATGGACCGGGTTATCATAAAGGGGAACAAGAGGACGCCACAGCGTTTTGTTGGGAGGGAAGCTATTGTAACAACACAATGCCTAAATGGATGGTATGTGGTAAAGACAATGGACAATGCGGAGAGTGTTAAATTGCAGTATCGCTCGCTCGCTAAGGTTTCAGATGACCCTTCAAAACCAGCCTCCAGCAAGGTGGCACCTCATTGGCTTTAA 1353 0.4701 MSSEEIGLASDQRIDNGLNSPLVFQEDPLRYSCGAPQRRVGDQGSKTRELGGFIDEKMFAVDRDRFFATQGLEFRRNVFGDCLDQRNPPEARNWNGNGSTATPSGDESDGEDDEDDEEDDDDDDVEGGAEVERLVGVNDASKGNSNPNSINDININSISGGNLANAADGISNGKAQHHSSYGSSREVLGKDGEIGPTQNNSGGNDEDHQQERLDKSQSAVTIAETDCEEYYSHYLQGTEGSASVQKAIAGENDCGFSGRKDVIFSSESVESLRAVLSDPITGALMDDAMILPCGHSFGGGGIQHVIRMKACSTCSQPISEESISPNLSLRVAVQAYRREEESQFYRSSKRRRERFDQGGYGDSTVMEQPRCRGVQFPFAVMDRVIIKGNKRTPQRFVGREAIVTTQCLNGWYVVKTMDNAESVKLQYRSLAKVSDDPSKPASSKVAPHWL 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g1650 450 MobiDBLite consensus disorder prediction 169 218 - -
Alju07g1650 450 MobiDBLite consensus disorder prediction 1 21 - -
Alju07g1650 450 MobiDBLite consensus disorder prediction 86 126 - -
Alju07g1650 450 ProSiteProfiles U-box domain profile. 271 343 IPR003613 GO:0004842|GO:0016567
Alju07g1650 450 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 62-RELATED 3 446 - -
Alju07g1650 450 MobiDBLite consensus disorder prediction 90 105 - -
Alju07g1650 450 MobiDBLite consensus disorder prediction 106 126 - -
Alju07g1650 450 SUPERFAMILY RING/U-box 267 342 - -
Alju07g1650 450 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 270 341 IPR013083 -
Alju07g1650 450 MobiDBLite consensus disorder prediction 1 19 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g1650 Alju-ChrAlju07 42743122 42747299 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g1650 216 450 Plant U-box Gene Family AT5G05230 59.091 1.53e-89 275