Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g1619 ATGTCCAGAGAAAGGGAAAATTTTGAAGAGATAGGGAAGAAGATAAAGAGGGAGGGAGATGTATCATCATCACAAATGGGAAGAAGACACATGTTGGGTCCTCCAGGAACCCTAAATACCATAACGCCATGTGCAGCATGTAAGCTCTTGAGGCGAAGATGTGCTCAGGAATGTCCCTTTTCTCCTTACTTTTCCCCTCATGAGCCCCAAAAATTTGCTTCTGTTCACAAGGTCTTTGGTGCTAGCAACGTCTCCAAGATGCTCATGGAGGTGCCAGAGAGTCAAAGAGCGGATGCAGCAAATAGTCTAGTGTATGAGGCAAATGTGAGGCTAAGAGACCCAGTTTATGGATGCATGGGTGCAATTTCTGCTTTGCAGCAACAAGTTCAATCTTTACAAGCGGAACTTAATGCTGTAAGGGCTGAAATACTTAATTACAAACTTAGGGAAGCTACTACTAACATCATTCCCTCCTCTCATCATCATCATCATCATATTCATCATCCTGTCCTCCCTCCTAATTCCTCTCGGGCCGTCTCAATGGCCGCTCCTCCACCACCGCCGCCACCTCCTCCTCCGCTGCCTCCTTCTCTTCCTTCTGCTTCTGATGATTCCTCTTCTTCCATGTATACCCAAATCCAGCAGAGGCCTCCCACCAATTATACCACAATTTCATCAAGTGATAATATTTCCTATTTTGGTTGA 705 0.4553 MSRERENFEEIGKKIKREGDVSSSQMGRRHMLGPPGTLNTITPCAACKLLRRRCAQECPFSPYFSPHEPQKFASVHKVFGASNVSKMLMEVPESQRADAANSLVYEANVRLRDPVYGCMGAISALQQQVQSLQAELNAVRAEILNYKLREATTNIIPSSHHHHHHIHHPVLPPNSSRAVSMAAPPPPPPPPPPLPPSLPSASDDSSSSMYTQIQQRPPTNYTTISSSDNISYFG 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g1619 234 Coils Coil 122 149 - -
Alju07g1619 234 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 39 180 - -
Alju07g1619 234 MobiDBLite consensus disorder prediction 158 234 - -
Alju07g1619 234 MobiDBLite consensus disorder prediction 179 199 - -
Alju07g1619 234 Pfam Lateral organ boundaries (LOB) domain 43 140 IPR004883 -
Alju07g1619 234 ProSiteProfiles LOB domain profile. 42 143 IPR004883 -
Alju07g1619 234 MobiDBLite consensus disorder prediction 1 35 - -
Alju07g1619 234 MobiDBLite consensus disorder prediction 200 234 - -
Alju07g1619 234 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g1619 Alju-ChrAlju07 42401235 42402362 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g1619 1 153 AS2 family AT2G30340 70.370 5.32e-75 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Alju07g1619 LOB 5.9e-41 No_clan