Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g1612 ATGGTTTCTAATAAAGACCTCAAGAAGAAGAGAGAAGCTCTGCATGAGAAGCTCCAACTCCTTCGTTCTATCACTCACTCTCATTCTATAGACAAAACCTCGATCATATTGGAGGCAACAAAGTACATCGAGGAGCTAAAGGAAAAGGTAGAAAGACTGAATCAAGACATAGCCACTGCAGAAACTTCATCATCAAAAGACCAAAATCATTTACCTATGGTTACAGTAGAAACCCTAGAAAAGGGATTCCTGATAAATGTATATTCAGACAAGAGTTGCCCAGGCCTGCTAGTTCCCATATTGGAGGTCTTGGAAGACATGGGTCTCAGCGTTATGGAAGCTAGGGTTTCCTGTTCTGACACTTTCCGATTTCAAGCTGTTGGAGGAGAAGAAGAAGAAGAAGGTGATAGCATGGATGCAGAAGCAGTGACACAAGCAGTGGGAAGAGCCATAAAGAATTGGAGAGAGAGTACTGGTCAACAATAA 486 0.4218 MVSNKDLKKKREALHEKLQLLRSITHSHSIDKTSIILEATKYIEELKEKVERLNQDIATAETSSSKDQNHLPMVTVETLEKGFLINVYSDKSCPGLLVPILEVLEDMGLSVMEARVSCSDTFRFQAVGGEEEEEGDSMDAEAVTQAVGRAIKNWRESTGQQ 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g1612 161 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 8 59 IPR036638 GO:0046983
Alju07g1612 161 Gene3D - 6 70 IPR036638 GO:0046983
Alju07g1612 161 Coils Coil 36 63 - -
Alju07g1612 161 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 9 159 - -
Alju07g1612 161 Coils Coil 4 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g1612 Alju-ChrAlju07 42326844 42328142 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g1612 14 149 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G10570 31.544 5.98e-12 60.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju07g1612 07 42326844 42328142 Alju07g1612 07 42326844 42328142 CCT
Alju07g1612 07 42326844 42328142 Alju07g1612 07 42326844 42328142 ECH
Alju08g1279 08 9657106 9658331 Alju07g1612 07 42326844 42328142 ECH