Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g1590 ATGTCGCAGAAGAAGAGGAAGTTATATCAATCAAAGCATCCATTGGGATCCTACCCCTTTGAGGCGTTTCTCTCTGGCTCATGGAAAGCTGTGGAACACATAAAAATTGAGGGAGGAACTCCAACCCTGCATTTTATCGATAATCAAAAAAGAGTTTTTAAGAAAAGCCCTGGTCCAGACATTCGGATAAGGTCGAGGAAAGCTACTCTATCAGATTGCTCCTGTTTTCTAAGACCTGGAATTGATGTATGTGTGTCATCAGCCTCTCAACAGGATAATAGTTCAGCAAAAATTTGTCTTGAACCTGAATGGGTTGATGCTAAAATAAGATCTGTACAGAGAAAGCGCCACGTATCTGAGTGTTCATGTGAATATTTTGTCAACCTCTATGTTAATCAAGGTCGTTATGATCCAGAGAAGAGAGTTCTTAGTACGGAGACTAAAGTTGTTGGAATAAATCAAATATCCATCCTCCAGAAGCTTGACCTTAATCCCTGTGAAGATCAGCATTATCGGTGGGATTTATCTGAGGATTGCTTTAAAGCACAAAAGACTAGACTGTTTGCAGGAAAATTCTTATCTGATTTTTCATGGTTAGTTGTTGCATCAGCTTTAAAGCAGGTCTCATTCTGTGTAAGATCTGTAGAAAGCAAGATTGTTTATCAAATTTTGGGAAGTGAACATTCTAGGTCTTCATTGAACTATAATTCTCTTGAACATGTAAATTTCAGATTAGACAATGGGATGCTATTACCCATTGTTTCTCATGTCATTCCATGTGACAACAATAAGGCAGACCAGGACAAAGACGCATATGAAGATGAGATCTCACCAGTTTCTTGCATTGAGGGATTACGCCGTTCCAAACGTCGTAACATAGAACCTGAACGTTATCTTGGTTATGATGATGCCTCCAAGTTGACTTTTGGTCATATTCGAACCGGTTTACCCAAGTCCAGCACAAGATATTATGATGAGAAAGCTGATGTTGATATACTAGCAAATTGTCTAGGAAAGGACATAGATTCATGTCAAAATATTAAGAAGATACATACCTTCCAGGAGGTCCTAGTGAACAACAGAAGCACTGCAAGTGGGATGGTGAAGTTAGAAAATGTTGATGAAAAAGGTCATGAGGCTCAACTTGTTATGGACTCTCTGCCTGATGGAGGTGGTCCAGTAGCCCTTGACCAACCTTTTCTCAACACCGATAGTACGGAAAATTCTAGGCATGAAAATTGTGTTTTTTCTGAATATAATCATCTGACTCATAGCCCTGAACTGAACAGGAAAATTGTCCATCCATGGGCATTTGAACCCTATGATCATCAATCAGAAGTTCCTGATCATCATCAGTCAGTTGTTAGGGATTCTCTGCATGATGGAGGTGGTCCAGTAGCCGTTGACCATTCTTTTCTCAACACCAATAGTACTGGAAATTCTTGGCATGAAAGTTGTGTTTTTTCTGAATATAATCATCTTACTCATAGCCCTGAACTGAACAGGAAAATTGTCGATCCATGGATATTTGAATCCTATGATAAATCTTCCGTAAGTGTCAACAAAGAGGATTTTTCTGCTCTGCAAGACATGGATACTGAAAATAGATGGGAAGGGATACATTCCAATGAAGAAATTCAAGAAAAAGAGTATCATTCACCAATGACAAGAAGCAAAAGTCGCAGGGAAGAAAGAACTTACAAAGGCAGATCCTTAAGTGATGCTGAAAATTCTGCAAAAGAGATTGGTGATAAATCTTCTGGATGTTATGATTTTGGTACCTGTAATATCCAGAAGAAGGATTTACCTGGTCTGCAGGACATGGATTCTGAAAATAGACAAGAAGGGGTACATTCTGATAAAGAAATTCAAGGGGGAAAATATCACCCACCAATGACGAGAAGTAAAACTCGTGAACTAGAAAGAACCGACAAAGACAGATCATCAAGTGATGCTGAAAAGTCTGCAAAAGTGGTTGGTGATAAATCTTCTGGGTGTTATAATTTTGGTACTTGTAATGTGCAGAGGAAGGATTTATCTGGTCTAGTGGACATGGATACTGAAAATAGACGGGAAGGGATGCATTCCGAGAAAGAAATTCAAGGGAAAAGTTATGACTCACCAATGACAAGAAGTAAAACTTGTGGGGAAGAAAGAACCTACAGAGACAGATCCTTGAGTGATGCTGGAAATTCGGCAAAAGAGGCTGGTGATAAATCTTCTGGGTGTTACTATTTTGGTGACTGTAATGTGCAGAGGCAGAATTTATCTGGTCTGGAGGACATGGATATTGAAAATAGATGGGAAGGGATCTGTTCCCATAAAGAAATTCAAGGGAAAAAATATCATTCACCAATGACAAGAAGTAAAAGTCATTGGGAAGAAAGAACTTACAAAAACAGATCCTCAAGTGATGCTGCCTACAAGGAATTGATAGATTTGTACTTAAAGAATGTTGACACAACGCTAACTAAGGAGGAGCCGCCTATAACTGACCAGTGGGCAGAATATAAGGCAACAAGCGACTATGGGCAAAACAAGGGAGCAGAAGCTGATGGTGAAGTTTCTGAAATTGATATGCTGTGGAAAGAAATGGAAGTTGCATTAGCATCATTTTATGTTTTTGACAACACAGAGGGTTCAAATGCTGTAGTCTCTTCGGAGACTGAGGAAAATTCTGACAAACTTTGTCAACACGAGTTTAGATTAAATGAAGAAATTGGGATTTACTGCTGTAGATGTGGCTTTGTGAAGACAGAGATAAAAGACATTTCACCACCCTTTGGGCAGAACTTGCGATGGCAACATGATGAAAAGCAGTGTGATGCTGGAAATTCGGAGGCAAAGGCCGATGAGAATGATAGTTTACATCTTTTTTCAGATCACACTTCAACCGATATGCCTGCATCTGAAGAAAATGATATTTGGGGACTGATCCCCAAACTTACCAGTAAGTTGCATGTCCACCAGAAAAAAGCTTTTGAATTTCTTTGGAAAAACATTTCTGGATCAGTGCAACCAGCATCTGTGAAAGCTGCATCTAAAAGAATAGGTGGCTGTGTGATATCTCATTCACCTGGAGCTGGAAAAACTTTACTAATTATTGCATTTCTTGCGAGCTACTTGAAGTTGTTCCCAGGAAAAAGGCCTTTGGTCCTTGCTCCAAAGACAACACTTTATACATGGTATAAAGAATTTATCAAATGGGAAATTCCTATACCAGTGTATCTGATCCAATCTCGACGTAGACTTGGAGCGTGCAAGGAGAAGCCAATGGTTATTCCTGGTGTTCCAAAGCCCACTGGAGATGTCAGGCATCTTTTGGACTCCCTGGGAAAAATACAGAAGTGGCATTCACACACTAGTGTTCTAGTCATGAGTTATAGTTACTTTTTGAAGCTGATGGAAGATAATTCAAAGTTTTCGTGCCGAAAGTATATGGCTGAAGTCTTGAGGAAAAGTCCAGGGGTTCTTATTCTAGATGAAGGGCACAATCCTAGAAGTACAGAATCATGTTTGAGGAAAGCCTTAATGAAAGTAGAGACAGAATTGAGAATACTACTTTCAGGCACATTGTTTCAGAACAATTTCTGTGAGTACTTCAACACTCTCTGCTTGGCAAGACCAAGATTTATTCATGAAGTTCTGAGAGAATTAGACCCCAAATACAAGGGGGATGAACGTAGAGCTGGGAAAAGATCAAACTTTATGGAAAGACAGGCAAGAAAATTATTCTTAGATAAAATTGCAAAAAAAATAGACTCTGATGATAATGATGATGAGAGGCTGCAGGGTCTGAACATGTTAAGAAAGATAACAAATGGGTTCATAGATGTTCATGATGGTGGAAGTTCTGATAATCTTCCTGGTTTGCATGTTTATACATTGTTAGTGAATATTACTGATTTTCAAGAACAGATTTTTCGGGCACTCTATGAAAAAGTATCTGACTCCAATCGATATCCTCTGGAGGTGGAGCTTTTGGTAACCCTTGGAGCAATACATCCATGGCTAATCAAAACGGCGACATTCTCTGATAAGTTTTTAACTGAAGCTCAACTGAGTGAGCTGGAAAAATTAAAGTTTGATTTGAAGATGGGACCAAAAGTAAGGTTTGTTTTGAGCCTTGTGTATCGTGTTGTCAAGGAGGAAAAAACTCTTATCTTCTTCCACTACATTGCACCTATGAGATTGTTCGTAGAACTATTCGAGAGGTTCTTCGGATGGAAAAGTGGTCGTGAAGTTTTGGTACTTAGTGGGGAACAAGATCTCTTTGAACGTGGGAGAGTGATCGACAAGTTTGAGGAGCCTGGAGGATCATCAAAGGTACTCCTTGCTTCAATTACAGCCTGCTCTGAAGGAATTAGTCTGACCGCGGCTTCTCGTGTGATTTTGTTGGAATCAGAGTGGAATCCATCAAGGACAAGGCAAGCCATTGCCCGCGCCTTTCGCCCCGGTCAGCAGAGGATTGTGATTTTGTTGAGGGTCAATCCCAATGGCAAGCAGAAAAGCTCGAAGACGATATCCTTCGAGAAATGA 4539 0.3979 MSQKKRKLYQSKHPLGSYPFEAFLSGSWKAVEHIKIEGGTPTLHFIDNQKRVFKKSPGPDIRIRSRKATLSDCSCFLRPGIDVCVSSASQQDNSSAKICLEPEWVDAKIRSVQRKRHVSECSCEYFVNLYVNQGRYDPEKRVLSTETKVVGINQISILQKLDLNPCEDQHYRWDLSEDCFKAQKTRLFAGKFLSDFSWLVVASALKQVSFCVRSVESKIVYQILGSEHSRSSLNYNSLEHVNFRLDNGMLLPIVSHVIPCDNNKADQDKDAYEDEISPVSCIEGLRRSKRRNIEPERYLGYDDASKLTFGHIRTGLPKSSTRYYDEKADVDILANCLGKDIDSCQNIKKIHTFQEVLVNNRSTASGMVKLENVDEKGHEAQLVMDSLPDGGGPVALDQPFLNTDSTENSRHENCVFSEYNHLTHSPELNRKIVHPWAFEPYDHQSEVPDHHQSVVRDSLHDGGGPVAVDHSFLNTNSTGNSWHESCVFSEYNHLTHSPELNRKIVDPWIFESYDKSSVSVNKEDFSALQDMDTENRWEGIHSNEEIQEKEYHSPMTRSKSRREERTYKGRSLSDAENSAKEIGDKSSGCYDFGTCNIQKKDLPGLQDMDSENRQEGVHSDKEIQGGKYHPPMTRSKTRELERTDKDRSSSDAEKSAKVVGDKSSGCYNFGTCNVQRKDLSGLVDMDTENRREGMHSEKEIQGKSYDSPMTRSKTCGEERTYRDRSLSDAGNSAKEAGDKSSGCYYFGDCNVQRQNLSGLEDMDIENRWEGICSHKEIQGKKYHSPMTRSKSHWEERTYKNRSSSDAAYKELIDLYLKNVDTTLTKEEPPITDQWAEYKATSDYGQNKGAEADGEVSEIDMLWKEMEVALASFYVFDNTEGSNAVVSSETEENSDKLCQHEFRLNEEIGIYCCRCGFVKTEIKDISPPFGQNLRWQHDEKQCDAGNSEAKADENDSLHLFSDHTSTDMPASEENDIWGLIPKLTSKLHVHQKKAFEFLWKNISGSVQPASVKAASKRIGGCVISHSPGAGKTLLIIAFLASYLKLFPGKRPLVLAPKTTLYTWYKEFIKWEIPIPVYLIQSRRRLGACKEKPMVIPGVPKPTGDVRHLLDSLGKIQKWHSHTSVLVMSYSYFLKLMEDNSKFSCRKYMAEVLRKSPGVLILDEGHNPRSTESCLRKALMKVETELRILLSGTLFQNNFCEYFNTLCLARPRFIHEVLRELDPKYKGDERRAGKRSNFMERQARKLFLDKIAKKIDSDDNDDERLQGLNMLRKITNGFIDVHDGGSSDNLPGLHVYTLLVNITDFQEQIFRALYEKVSDSNRYPLEVELLVTLGAIHPWLIKTATFSDKFLTEAQLSELEKLKFDLKMGPKVRFVLSLVYRVVKEEKTLIFFHYIAPMRLFVELFERFFGWKSGREVLVLSGEQDLFERGRVIDKFEEPGGSSKVLLASITACSEGISLTAASRVILLESEWNPSRTRQAIARAFRPGQQRIVILLRVNPNGKQKSSKTISFEK 1512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g1590 1512 MobiDBLite consensus disorder prediction 604 657 - -
Alju07g1590 1512 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 1373 1512 IPR001650 -
Alju07g1590 1512 MobiDBLite consensus disorder prediction 688 738 - -
Alju07g1590 1512 CDD SF2_C_SNF 1361 1495 - -
Alju07g1590 1512 SMART helicmild6 1397 1486 IPR001650 -
Alju07g1590 1512 Gene3D - 1289 1500 IPR027417 -
Alju07g1590 1512 PANTHER SNF2 DOMAIN-CONTAINING PROTEIN CLASSY 2-RELATED 545 1492 IPR044567 GO:0080188
Alju07g1590 1512 Gene3D - 957 1252 IPR038718 -
Alju07g1590 1512 MobiDBLite consensus disorder prediction 712 729 - -
Alju07g1590 1512 SMART ultradead3 982 1215 IPR014001 -
Alju07g1590 1512 MobiDBLite consensus disorder prediction 541 584 - -
Alju07g1590 1512 Pfam SNF2-related domain 984 1314 IPR000330 GO:0005524|GO:0140658
Alju07g1590 1512 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 1011 1210 IPR014001 -
Alju07g1590 1512 MobiDBLite consensus disorder prediction 541 581 - -
Alju07g1590 1512 MobiDBLite consensus disorder prediction 600 657 - -
Alju07g1590 1512 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1286 1500 IPR027417 -
Alju07g1590 1512 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 978 1212 IPR027417 -
Alju07g1590 1512 Pfam Helicase conserved C-terminal domain 1370 1485 IPR001650 -
Alju07g1590 1512 MobiDBLite consensus disorder prediction 688 704 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g1590 Alju-ChrAlju07 42129354 42135126 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g1590 1411 1496 RAD5 or RAD16-like Gene Family AT5G05130 41.379 1.50e-09 60.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SNF2 Alju07g1590 SNF2_N 3.9e-17 CL0023