Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g1585 ATGGGAGGCACTTCCCCTTGTGCTTCATGCAAGTTGCTACGACGCCGTTGCGCCAAAGATTGCATCTTTGCTCCTTATTTCCCTTCCGACGACCCTCAAAAGTTCGCCATCGTTCACAAGGTTTTCGGAGCTAGCAACGTCGGGAAAATGTTGCAGGAGCTTCCAGTTCATCAAAGAGCAGACGCAGTGAGCAGCTTAGTATATGAAGCGAATGCAAGGGTACGAGACCCAGTGTACGGGTGTGTGGGGGCCATATCGTTTCTGCAGAATCAAGTTTCAGAGCTTCAAATGCAGCTCGCTGTGGCTCAGGCTGAGATCCTCTGCATCCAGATGCAGCATGAGCCTGCTGAGCCTGTAGCTGTGATGCAAAACCCAGAACTTGATGATCCCAATCATCATCACCAGAGACAACAACCTTATTATCTCCAAAACGAGCAGTACCTTAACTTTGCGTCTTCCAGCAATGTAATTCAGGACTCTCTTCAGAGAGAGAGCTTCTTTGGCCACGACATGGTTTCTTAA 522 0.4904 MGGTSPCASCKLLRRRCAKDCIFAPYFPSDDPQKFAIVHKVFGASNVGKMLQELPVHQRADAVSSLVYEANARVRDPVYGCVGAISFLQNQVSELQMQLAVAQAEILCIQMQHEPAEPVAVMQNPELDDPNHHHQRQQPYYLQNEQYLNFASSSNVIQDSLQRESFFGHDMVS 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g1585 173 Coils Coil 85 105 - -
Alju07g1585 173 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 4 138 - -
Alju07g1585 173 Pfam Lateral organ boundaries (LOB) domain 6 103 IPR004883 -
Alju07g1585 173 ProSiteProfiles LOB domain profile. 5 106 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g1585 Alju-ChrAlju07 42084916 42085549 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g1585 3 116 AS2 family AT2G30130 91.228 1.58e-74 220
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Alju07g1585 LOB 2.8e-42 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju07g1585 07 42084916 42085549 Alju07g1585 07 42084916 42085549 ECH