Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g1583 ATGGAGAGGCTGGCGGAGGTGAGCGAATCAGAGATACGAATAGACTTTGCTCTCAACTGCAAATGCCGAGCCACCGTGAGTCTCCGGTCTCTATGCGCCGCCTCGCCACTCGCCTTCAAGGTCCAGACCTCTTCCCCGAGCAAGTTCCTCGTTAACCCTCCCTCCGGCGTCATCGTTCCTCTCTCTCACGCCACCTTCCAAGTCATCCTCAAGTCTCAGTCTCAGCTTCCCCCAACCTTCCCTCGCTCTCCCTCCGATCGCTTCCTCGTTAAAATCGCCCAATTCCTCCCCAATACCTCCAATCCCATTCCCTCTCACGCCATTAACTCATGGTTCTCCTCTCTCCCGTCCACCGTTTCCACTCAGAACCTCAAACTCAAGGTCGCCTTCGTCGGCCCACTCCTTCTTCGCCATGCCGTCGCAAGTGGTGATTTGGATGCTGTCAGGAACCTCATCAAGCGGCAGAGATCCTTACTGGCCGATTTGTCACCCAATGAAGCCGAGTCGCTCCTCCGAGTCGCCACCGAGTTGGTTAATCCCGACGGCATGGTTCACTTGCTACTGGAAGCTGGGCTGAGAGTGGAGGAGGAATTGGGATCTGGTAACGTGGACCCGAGATGGGCTTCGAAGGGATGGGATGAGTTACACGTGGCGGCGGCTTTTGATCGGATGGATGACGTCCTGAGGTTGTTAAAGACCAACCCGTCGTGGACGTTGGATTCCAGAGATCACACTGGCAGTACCCCTTTGCATTTGGCGGCGGATAAGGGAAATATAAGGTGCGCGCTCTTGCTGGTGGAAGGCGGGGCGAATGTGAATGCCCGGTGTAACGACGGTAGCACGCCGTTGCACAAAGCGGCGGCGAATGGTGACCGTAGAATGGTGGAAATGCTCGTTGAGATGAGCGCTGACCCAACTATAACCGACGATCGTGACCGTTCAGCCCTTAACATTGCTAGTGATGAAGGACATAAAGAGATAGTGCAAATAATGGAGCAAGGAGAAGAAGTGCTAATGGCGGCGAGGCATGGGGACGTGAAGAAACTGGAGACACTGTTGAAGAGAGGAGCGAGTGTACAGTACCGTGATCAGTATGGTTTAACAGCACTTCATGCGGCGGCCATGAAAGGGCACAAGGAGATGGTATCGATGCTGATGGAAACGGGGTTGGACTTGGAATGTGAGGATGAGGAAGGTCACGCGCCGCTGCATATGGCGGTGGAGAGCGGTGACCAGGAGATTATACAAGTTTTAGTGAACAAGGGTGTGAATGTAAATTCTGTCAATATGAAGGGTGCCACCCCTTTGTACATGGCTAGAATCTTGGGATACGATGCCATAGCTGAATTTCTTGTCAGCAAGGGAGCAATGTCCTGTCTTCCTGTAATTTTACGTACAAAAGATGAAACGCCTCAAGACCTTACAGAGGTGGTAATAGTGCCCTTCTTAAAACACTTCACTGCTACGGTGCCCTTCTTAAAACACTTCACCATCCCTGCTTTCTTCGTCTTCACCATGAAAACCGTCCTTCGCTTATCCTTCTTCCTACTCCTCTCCTTCTTTACAGAACCAGTCTTGCCCTTCTCCCACCAAGACCACTACACTAAATCCTCCTACCTCTCTCTCCACCGCCACCACCGTCCCCAAGAATACTCGGAGGTCACCTATCCTCTACCCACCGGTCCATCATGCTCCCACCTTATCCTACGCCACTCCTTCGCCCATACCATCGATTCCCCTCCCTTCTCCACCCCCTACATCCCTCCCTCTCATTGCCCTTCCCCTTGGTCCCGCGTTCTCCTCCATTTCCACGCCGATTGTAAAGGAGAACAGTACGATCGCATCGCCGGCTTGTGGCTCGGCGGCGTCGAGCTCCTTCGCACCAGCACCGCCGAGCCCACCAAGGATGGAATCTTCTGGAATGTTTGGAAGGATGTCACCAGGTACTCCTCTCTCTTGACTAGGTCTGACTTGGATCTCACGATGATGCTGGAAAACGTCATTAATCATCAATTCACTGGAATCTACCACGTTACCATCACTCTTTCGCTCTTCAAAGGCCACGCTGTTGTTGGGGCTCCGGTTGGGGTTTCTTGCGATAGGAGATTGAGGATCCTTAGGGATGGATCAGATGGATGGATCTCTGAAGTAACGGTGGAACGGGATGATCTAGGTGATACCAATGTGCTTAGGGGTTCATTGGATTTGCATGAATCCCCGGCTGATTTGATTATTCCGATATCTGATGACGGCGACCGTGGGTTTTGGTTTAGAGTTGAGCGTGAATCGGATTTGCATTCCCGAAGAATTCGAATTCCAACAAATACTCACCGGGCAGTTCTTGAGTTGTATGTGTCTTATCATGGCAACGATGAGTTTTGGTACTCAAACCCACCCAATTCATACATCAAAACAAACGGCCTAAGCACACGCCGAGGTAATGGAGCTTATAGGGAAGTGTATGTCACAATCGACGGCGAAGTTGTCGGGTCAGAGATTCCATTTCCGGTCATTTTTACGGGAGGAATCAATCCCCTCTTCTGGGAGCCTATTGTTGCGGTTGGGGCTTTCAATCTTCCTTCTTATGATGTAGATTTAACACCTTATCTAGGTAAGATTTTGGATGGGAAAACACATAGGTTTGGAATAGGTGTGACTCGGGGCATCTCATTCTGGCTTGTCAATGCAAATTTACACCTTTGGTTGGATCATCATTCCGAAGTAGTTCATGCTGAACGAATCATTAACAAGAGTCCAGAAGTGACAATAGAGCGCCAAGAAGAATTTACAGGACTTGATGGGTCGTTTGACGTAGATACGGAGAGGGAAACAAAAGTAGCAGGGTGGGTTAGATCAAGTGCAGGCAACTTTACCACAATTATCTGGCAGGAATACAAGTCGAAGAACTCCATTAGGTTTCAAAAGAATGGAACCTACAAGTTTGTGAAACAAAAAATCAAAGCAAAGAAGAAGATGAAGGTAATAAATGGTAGGGGCCAAGTGGTTGCATTGTTGAAGGTTAAGAGGAAGTATCCTCTGCGTGTGATTACTTGGACTAAGCCATGTTTGCGTAAGGACAGATATCTACTTGTTACCAATGTTACTCATGCTTTGAAGGAGGAGCACTCTGGTGCGTGCTTCTCAAATTCAGTAAGTAACAAACAGGATTCTAAGGGATGGATGGAAGTGAAGGGTCACTCTGTTCTATCAGGGGAAGCTATAACCCGTCAAAATTATACTTACCATGACAGGTTCAACTGCTATTCTCGAAATGTTGCCGCATCTAATGGCAGGATACTTGAAGACAAGTCCACTTTTCAATGTGAGGAATGA 3333 0.4944 MERLAEVSESEIRIDFALNCKCRATVSLRSLCAASPLAFKVQTSSPSKFLVNPPSGVIVPLSHATFQVILKSQSQLPPTFPRSPSDRFLVKIAQFLPNTSNPIPSHAINSWFSSLPSTVSTQNLKLKVAFVGPLLLRHAVASGDLDAVRNLIKRQRSLLADLSPNEAESLLRVATELVNPDGMVHLLLEAGLRVEEELGSGNVDPRWASKGWDELHVAAAFDRMDDVLRLLKTNPSWTLDSRDHTGSTPLHLAADKGNIRCALLLVEGGANVNARCNDGSTPLHKAAANGDRRMVEMLVEMSADPTITDDRDRSALNIASDEGHKEIVQIMEQGEEVLMAARHGDVKKLETLLKRGASVQYRDQYGLTALHAAAMKGHKEMVSMLMETGLDLECEDEEGHAPLHMAVESGDQEIIQVLVNKGVNVNSVNMKGATPLYMARILGYDAIAEFLVSKGAMSCLPVILRTKDETPQDLTEVVIVPFLKHFTATVPFLKHFTIPAFFVFTMKTVLRLSFFLLLSFFTEPVLPFSHQDHYTKSSYLSLHRHHRPQEYSEVTYPLPTGPSCSHLILRHSFAHTIDSPPFSTPYIPPSHCPSPWSRVLLHFHADCKGEQYDRIAGLWLGGVELLRTSTAEPTKDGIFWNVWKDVTRYSSLLTRSDLDLTMMLENVINHQFTGIYHVTITLSLFKGHAVVGAPVGVSCDRRLRILRDGSDGWISEVTVERDDLGDTNVLRGSLDLHESPADLIIPISDDGDRGFWFRVERESDLHSRRIRIPTNTHRAVLELYVSYHGNDEFWYSNPPNSYIKTNGLSTRRGNGAYREVYVTIDGEVVGSEIPFPVIFTGGINPLFWEPIVAVGAFNLPSYDVDLTPYLGKILDGKTHRFGIGVTRGISFWLVNANLHLWLDHHSEVVHAERIINKSPEVTIERQEEFTGLDGSFDVDTERETKVAGWVRSSAGNFTTIIWQEYKSKNSIRFQKNGTYKFVKQKIKAKKKMKVINGRGQVVALLKVKRKYPLRVITWTKPCLRKDRYLLVTNVTHALKEEHSGACFSNSVSNKQDSKGWMEVKGHSVLSGEAITRQNYTYHDRFNCYSRNVAASNGRILEDKSTFQCEE 1110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g1583 1110 PRINTS Ankyrin repeat signature 414 428 IPR002110 GO:0005515
Alju07g1583 1110 PRINTS Ankyrin repeat signature 366 381 IPR002110 GO:0005515
Alju07g1583 1110 ProSiteProfiles Ankyrin repeat profile. 365 397 IPR002110 GO:0005515
Alju07g1583 1110 Gene3D - 335 475 IPR036770 -
Alju07g1583 1110 ProSiteProfiles Ankyrin repeat profile. 278 310 IPR002110 GO:0005515
Alju07g1583 1110 Pfam Ankyrin repeats (3 copies) 339 427 IPR002110 GO:0005515
Alju07g1583 1110 Gene3D - 134 334 IPR036770 -
Alju07g1583 1110 ProSiteProfiles Ankyrin repeat region circular profile. 431 456 - -
Alju07g1583 1110 Gene3D Immunoglobulins 2 131 IPR013783 -
Alju07g1583 1110 SUPERFAMILY PapD-like 10 135 IPR008962 -
Alju07g1583 1110 ProSiteProfiles Ankyrin repeat profile. 245 277 IPR002110 GO:0005515
Alju07g1583 1110 PANTHER PEPTIDE-N4-(N-ACETYL-BETA-GLUCOSAMINYL)ASPARAGINE AMIDASE A PROTEIN 528 1109 IPR021102 -
Alju07g1583 1110 ProSiteProfiles Ankyrin repeat profile. 398 430 IPR002110 GO:0005515
Alju07g1583 1110 Pfam Ankyrin repeats (many copies) 247 299 IPR002110 GO:0005515
Alju07g1583 1110 SMART ANK_2a 398 427 IPR002110 GO:0005515
Alju07g1583 1110 SMART ANK_2a 245 274 IPR002110 GO:0005515
Alju07g1583 1110 SMART ANK_2a 131 160 IPR002110 GO:0005515
Alju07g1583 1110 SMART ANK_2a 333 361 IPR002110 GO:0005515
Alju07g1583 1110 SMART ANK_2a 431 460 IPR002110 GO:0005515
Alju07g1583 1110 SMART ANK_2a 365 394 IPR002110 GO:0005515
Alju07g1583 1110 SMART ANK_2a 278 307 IPR002110 GO:0005515
Alju07g1583 1110 SMART ANK_2a 210 241 IPR002110 GO:0005515
Alju07g1583 1110 ProSiteProfiles Ankyrin repeat profile. 431 456 IPR002110 GO:0005515
Alju07g1583 1110 ProSiteProfiles Ankyrin repeat region circular profile. 245 275 - -
Alju07g1583 1110 Pfam MSP (Major sperm protein) domain 35 98 IPR000535 -
Alju07g1583 1110 ProSiteProfiles Ankyrin repeat region circular profile. 278 310 - -
Alju07g1583 1110 ProSiteProfiles Ankyrin repeat region circular profile. 398 429 - -
Alju07g1583 1110 ProSiteProfiles Major sperm protein (MSP) domain profile. 3 129 IPR000535 -
Alju07g1583 1110 SUPERFAMILY Ankyrin repeat 136 456 IPR036770 -
Alju07g1583 1110 ProSiteProfiles Ankyrin repeat region circular profile. 365 397 - -
Alju07g1583 1110 Pfam Peptide N-acetyl-beta-D-glucosaminyl asparaginase amidase A 562 1013 IPR021102 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g1583 Alju-ChrAlju07 42064625 42069537 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g1583 265 454 Ion Channels AT2G26650 28.646 1.86e-11 66.6