Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g1577 ATGAAGGGGTACGAGCCACGTTCGAGTTCATCCTGCGCCGCCTGCAAGCTCCTGAAGCGCCGGTGCACCCCCACCTGCATCTTCGCCCCCTACTTTCGCTCCGACGAGTGCAAGAAATTCGCCAAAGTCCACAAGGTGTTTGGCGCCAGCAATGTCAGCAAGATCCTCTTTGAGGTCCCCGAGGAGCAGCGCGAAGACACCGTCAACTCCCTCGCCTACGAGGCCGACGCCCGCCTCAAAGATCCCGTTTACGGTTGCATTGGCGCCATCGCTCTCTTGCAGACCAAGATGGTTGAGCTCCAGCACGACCTCGCCGTCGCCCGCGCCCGTCTCGCCCGCTATTCCTCCGCCTCCGTCGCCGCCGCCGCCGATGACTCCTTCGTTTCCTTCCCTTCTTCTTCCATTGACAATAGCTTCGTCCCTGCTCACGTGGGTCTGCCTCCTTTCCCTGACTCTTCCTCCTCTTGCTGCGATGTCGACGATGGTTTCTCCTCGTCTCAGGTTCAGTTATCGAGCCGACATGATATGGTGGATGATTTTTTCCAAACCCCATATATATTCTGA 564 0.5816 MKGYEPRSSSSCAACKLLKRRCTPTCIFAPYFRSDECKKFAKVHKVFGASNVSKILFEVPEEQREDTVNSLAYEADARLKDPVYGCIGAIALLQTKMVELQHDLAVARARLARYSSASVAAAADDSFVSFPSSSIDNSFVPAHVGLPPFPDSSSSCCDVDDGFSSSQVQLSSRHDMVDDFFQTPYIF 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g1577 187 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 9 136 - -
Alju07g1577 187 Coils Coil 90 110 - -
Alju07g1577 187 ProSiteProfiles LOB domain profile. 10 111 IPR004883 -
Alju07g1577 187 Pfam Lateral organ boundaries (LOB) domain 11 108 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g1577 Alju-ChrAlju07 42017601 42018164 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g1577 1 126 AS2 family AT3G11090 77.344 4.54e-67 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Alju07g1577 LOB 2e-37 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju07g1577 07 42017601 42018164 Alju07g1577 07 42017601 42018164 ECH