Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g1575 ATGGGCGACCCTTCATCCCCTCCGTCTCAGTCCCCTGAAGCCGCCGCCGCCACGCCCACTCACCACCCTTCTTCTCGCAAACCCAAAGGCAAAGGTGGTCCGGACAACAACAAGTTTAGGTTTCGCGGAGTCAGGCAGCGAAGCTGGGGTAAATGGGTCGCCGAGATCCGTGAGCCCCGCAAGCGTACCCGCAAGTGGCTCGGCACCTTCTCCACCGCCGAAGACGCCGCCCGTGCCTACGACCGAGCCGCCCTCTTCCTCTACGGCTCCAGAGCCCAGCTCAACCTCCAGCCTTCTATCTCCTCCTCCTCCTCCTGCCGCCCCTCCAATAATTCTTCCTCCACCCAAACCCTCCGCCCGTTGCTCCCCCGTCCACCCGCCGCCGCCGCCGCCTCGTTGCCCTACGGCCTTTATAATACCCAGTTTCTCTGCCCAGTCAACAACGCACTACAAGTACTGCAGCAACATCATCCACACAAAGTGGTGAAATTTTATGGGTCCCCGCAGTCCGAGGGTGGAAATAATACTAATCTGGATGACTCCACTACAGTAGCAACCTCGTACCCGAACCTTAGCCACGATCTGATGATGCATGCGTCGTCAAACAATAATCAGGAGCAGCATAGTCATAGTCAAGGACAGAGTGATTGCATGTACGATGATATTAGCTCCTTGGTAGGATCAGGCTTGAGTAATTCTTCTTCCCAGACTACTATTGTAACGCCGCAGCGGGCCACGGCCACTATGGATCTGCCGGTGGCGGCTGTGGGACCAGATAGCGTGGGATCACCGTCTATGTGGCCGACGATGAGAAATGAAGAAGAGTACTACCCTTCTTGTCTTTGGGACTATAATGATCCTTTCTTGTTTGATTTTGAGGTGGAATCAATTAGTGGACAATAG 903 0.5526 MGDPSSPPSQSPEAAAATPTHHPSSRKPKGKGGPDNNKFRFRGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAEDAARAYDRAALFLYGSRAQLNLQPSISSSSSCRPSNNSSSTQTLRPLLPRPPAAAAASLPYGLYNTQFLCPVNNALQVLQQHHPHKVVKFYGSPQSEGGNNTNLDDSTTVATSYPNLSHDLMMHASSNNNQEQHSHSQGQSDCMYDDISSLVGSGLSNSSSQTTIVTPQRATATMDLPVAAVGPDSVGSPSMWPTMRNEEEYYPSCLWDYNDPFLFDFEVESISGQ 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g1575 300 MobiDBLite consensus disorder prediction 1 42 - -
Alju07g1575 300 MobiDBLite consensus disorder prediction 163 187 - -
Alju07g1575 300 MobiDBLite consensus disorder prediction 98 120 - -
Alju07g1575 300 CDD AP2 40 97 IPR001471 GO:0003700|GO:0006355
Alju07g1575 300 SUPERFAMILY DNA-binding domain 41 98 IPR016177 GO:0003677
Alju07g1575 300 Pfam AP2 domain 40 89 IPR001471 GO:0003700|GO:0006355
Alju07g1575 300 Gene3D AP2/ERF domain 39 97 IPR036955 GO:0003700|GO:0006355
Alju07g1575 300 MobiDBLite consensus disorder prediction 168 187 - -
Alju07g1575 300 PRINTS Ethylene responsive element binding protein signature 63 79 IPR001471 GO:0003700|GO:0006355
Alju07g1575 300 PRINTS Ethylene responsive element binding protein signature 41 52 IPR001471 GO:0003700|GO:0006355
Alju07g1575 300 SMART rav1_2 40 103 IPR001471 GO:0003700|GO:0006355
Alju07g1575 300 MobiDBLite consensus disorder prediction 1 18 - -
Alju07g1575 300 FunFam Ethylene-responsive transcription factor 2 40 98 - -
Alju07g1575 300 ProSiteProfiles AP2/ERF domain profile. 40 97 IPR001471 GO:0003700|GO:0006355
Alju07g1575 300 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 17 220 - -
Alju07g1575 300 MobiDBLite consensus disorder prediction 98 123 - -
Alju07g1575 300 MobiDBLite consensus disorder prediction 28 42 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g1575 Alju-ChrAlju07 41971188 41972090 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g1575 24 292 AP2-EREBP Transcription Factor Family AT2G40220 44.667 3.75e-43 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Alju07g1575 AP2 2.7e-13 CL0081