Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g1558 ATGACGATTTCACTCTTCTCCGTCAACGTCTGCCTCATCGCCGCCGCCGCCGTCACCCTCCTCTTCTCTGAAATCCCCTTCATCCATGCTCTGGGTTCCGGCGCCACTCTTACCGTAATCGATGACGACTCCTCCGGCACCGTCTGTGGCATCGTGGCAGGGCAAACAACCCAGCGCATTGAATGCTACCGTCGTGGTCAGATCGTTCCCGTTACCCCCAACATTTCGTTTTCTTCGATTTCCGGCGGGAGGAGCTACTTCTGTGGCCTTAGGTCCGGTAACTTCAGTTTGCTCTGCTGGGACCCTGTCTCTTCCAATTCCACCTATTCCTTCCAAGAGAAAAGGCTTTACTCTAATTTTACTGTTCTGTTGGAGAATCTGGCGGTTGGGGATACCCAAGTTTGCGCCACAGTCGTGGGTTCTGGCTCCGTTCAGTGCTGGAGACCCAATGGCCAACCTACACCGAATCAATTTGCGACGATAACATCTGGGTCTGGATTTTCCTGCGGGATCTTGAAGAATACTTCATGGGTTCATTGTTGGGGAATGAGCGCATTTTTGGGTCAAATACTGAACAGATTCGGAGACATGCCTATGTTGAGTCTTGTCGCCGGCGATTCACATGTTTGTGGATTGAATTCAACAGGGTTTGTGGTATGTGGAGGAAGTAACAGTTCTGGGCAGCTTAATGTTCCCCAAGGAGGACCTCTGGAATATTCTGGGTTGGCTCTCGGAGCTGAGCATAGCTGCGCGATCAGACAATCGAATCGTTCGGTTGTTTGCTGGGGCGGCGGAGGGCAGTTCTCGGCGAATTTTTCAGAAGGAACAACATCGTTTGAGTTAATTGTTTCTGGGTCAAATTTTACTTGTGGATTAGTCTCTGGCAATTTCTCTGTAATGTGTTGGGGACCTGGTTGGGCTAATAATAATTCTGGCTCTAATACGCTTGAGCTTCCTTTGCCTCCTATTCTTCCAGGCCCTTGTGTTCAATCTTCTTGTGAGTGTGGTCAATATCCTCAATATCAAAATCTGTGCTCTGGTTCTGGTACCATTTGCAGGCCTTGTTCTCCAAACATTTCAGCCCCTGCGCTGCCGCCATTGGTTTCTCCTCCGCCGTCACGGTCAAGGACATTGACAAGGGGTTTATTGGCATTCGCCATTGTTGGATCCGTCGGAGCTTTTGCCGGTATATGTACTATAATTTATTGCTTGTGGACTGGGGTTTGTTTTGGTAAGAAGAAAGTTCACAATTCTGTCCAACCAAGAATCAACAGAGAAGGTAGTTCCAATAATGGAGGAGGTGCTGTAATTTCTAGCAGTAGCCCGCCTTCAAGATCATCCACCATTAGACGTCAGGGCTCAAGGATAATGAGGCGGCAGAGGAGCGGAACATCATCGACAAAACATCCGGATAGGGCGGAGGAATTCACTCTAGCCGAGCTTGTGGTGGCCACTAATAATTTTTCCCTTGAACACAAGATTGGTGCCGGTAGCTTTGGTGTTGTGTACAAAGGCAAACTCGCGGATGGTCACGAGGTGGCGATCAAGAGGGGTGAGATTGGTTCAAAGATGAAGAAGTTTCAAGAGAAAGAGAGTGCATTTGAGTCAGAAATCGCATTCTTGTCACGTTTACACCACAAACACTTGGTCAGGCTAGTTGGTTTCTGTGAAGAAAAAGATGAAAGGCTCTTGGTGTATGAGTACATGAAGAATGGAGCATTACATGATCATCTTCATGACAAGAACAATGTGGAAAAGAGTAGTAATTTCTTGAATTCTTGGAAAATGAGGATCAAGATCGCGCTAGACGCTTCTCGAGGGATTGAATATCTCCACAACTATGCAGTCCCACCAATAATTCACAGGGACATCAAGTCTTCCAACATTCTTCTCGACGCGAATTGGACGGCGAGAGTGTCTGATTTTGGATTGTCATTGATGGGTCCAGACTCTGATCACGATTACCGGCCGACAAAGGCGGCAGGAACCGTAGGATACATTGATCCTGAGTACTATGGTCTGAATGTCTTGACAGCAAAGAGTGATGTATATGGGTTTGGAATAGTGCTTTTAGAACTCTTAACCGGAAAGAGAGCCATATTCAAGCATGGTGAAAATGGTGGCACCCCGGTGAGTTTGGTGGACTTTGCGGTGCCTGCAATAATGGCCGACGAAATGTCCAAGATTCTGGACACGAGGGTCGGACCACCGGAGATGAACGAGGCGGAGGCGGTGGAGCTGGTGGCGTATACCGCAATGTACTGCGTGAATTTGGAAGGGAAGGACAGACCAACAATGACTGACATTGTGGCCAATTTGGAGAGGGCCTTGTCTCTTTGTGATAGTAGTCATGGCAGCATCTCCAGTGGCACAATCTCTATTGTTTCAGAATGA 2394 0.4804 MTISLFSVNVCLIAAAAVTLLFSEIPFIHALGSGATLTVIDDDSSGTVCGIVAGQTTQRIECYRRGQIVPVTPNISFSSISGGRSYFCGLRSGNFSLLCWDPVSSNSTYSFQEKRLYSNFTVLLENLAVGDTQVCATVVGSGSVQCWRPNGQPTPNQFATITSGSGFSCGILKNTSWVHCWGMSAFLGQILNRFGDMPMLSLVAGDSHVCGLNSTGFVVCGGSNSSGQLNVPQGGPLEYSGLALGAEHSCAIRQSNRSVVCWGGGGQFSANFSEGTTSFELIVSGSNFTCGLVSGNFSVMCWGPGWANNNSGSNTLELPLPPILPGPCVQSSCECGQYPQYQNLCSGSGTICRPCSPNISAPALPPLVSPPPSRSRTLTRGLLAFAIVGSVGAFAGICTIIYCLWTGVCFGKKKVHNSVQPRINREGSSNNGGGAVISSSSPPSRSSTIRRQGSRIMRRQRSGTSSTKHPDRAEEFTLAELVVATNNFSLEHKIGAGSFGVVYKGKLADGHEVAIKRGEIGSKMKKFQEKESAFESEIAFLSRLHHKHLVRLVGFCEEKDERLLVYEYMKNGALHDHLHDKNNVEKSSNFLNSWKMRIKIALDASRGIEYLHNYAVPPIIHRDIKSSNILLDANWTARVSDFGLSLMGPDSDHDYRPTKAAGTVGYIDPEYYGLNVLTAKSDVYGFGIVLLELLTGKRAIFKHGENGGTPVSLVDFAVPAIMADEMSKILDTRVGPPEMNEAEAVELVAYTAMYCVNLEGKDRPTMTDIVANLERALSLCDSSHGSISSGTISIVSE 797
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g1558 797 Pfam Protein kinase domain 489 771 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju07g1558 797 Gene3D Phosphorylase Kinase; domain 1 449 568 - -
Alju07g1558 797 Gene3D Transferase(Phosphotransferase) domain 1 569 786 - -
Alju07g1558 797 MobiDBLite consensus disorder prediction 421 470 - -
Alju07g1558 797 ProSitePatterns Serine/Threonine protein kinases active-site signature. 619 631 IPR008271 GO:0004672|GO:0006468
Alju07g1558 797 SMART serkin_6 488 777 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju07g1558 797 Gene3D - 194 352 IPR009091 -
Alju07g1558 797 Gene3D - 23 193 IPR009091 -
Alju07g1558 797 CDD STKc_IRAK 494 775 - -
Alju07g1558 797 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 199 783 IPR044815 GO:0004674
Alju07g1558 797 MobiDBLite consensus disorder prediction 421 451 - -
Alju07g1558 797 ProSiteProfiles Protein kinase domain profile. 488 777 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju07g1558 797 FunFam Serine/threonine-protein kinase-like protein CCR4 569 790 - -
Alju07g1558 797 SUPERFAMILY RCC1/BLIP-II 68 307 IPR009091 -
Alju07g1558 797 ProSitePatterns Protein kinases ATP-binding region signature. 494 516 IPR017441 GO:0005524
Alju07g1558 797 SUPERFAMILY Protein kinase-like (PK-like) 465 773 IPR011009 -
Alju07g1558 797 FunFam serine/threonine-protein kinase-like protein CCR1 457 568 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g1558 Alju-ChrAlju07 41699470 41701863 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g1558 6 797 Receptor kinase-like Gene Family AT3G55950 60.602 0.0 887
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Alju07g1558 Pkinase 3.3e-45 CL0016