Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g1534 ATGTCTTCTTCTCAAACCTTTCTTCCACCCACATTTGCCAAGCCTATGGGACCAGAAACTGATAGAGTCTCTCTGCTCACTTTGAAGGAGAAGCTCACAAATGGCAATCCTCAACTTCTACCTTCATGGAATAGTTCTCTCCACTTCTGTAAATGGGAAGGTGTTTCCTGCAGTGCTCTTCACACCAGAGTCTCTAAGTTGCACTTAACAGATCCAAGTTTGGATGGATATCTTGCGCCAGCAATAGGTAATCTAACATTCCTTAAAGTATTAAATATTACTTACACCAGAGTGCATGGTGAGATCCCCAAAGAAATTGGCCGTCTCAAACGGTTGCGAATTCTCTTCTTGAGACGTAATAACTTTCAGGGAGAGATTCCCGTACAGCTTGCTAACTGTTCAAATCTGCAATTTATAGTCCTCAACGTCAATAACTTGACTGGCAAAGCTCCTTCCTGGTTAGGATCTATGCGATCACTTCAGTCCTTGAACCTTGATGTCAATAAGTTCGTTGGTACTATTCCTCAGTCCTTGGGAAATCTTTCATCATTAAGGATCTTGTCTCTCCCTGGAAATAATCTGCAAGGAAGTATACCTCAAACTCTAGGCCAGCTAACAAGTTTGATCGCTCTAGGACTAGCTGTTAATAATTTGTCTGGAATAATTCCTTCATCGCTCTATAATCTTTCCAATATTGAGGAATTCGATTTGGGAGATAACCACTTGTCCGGAACTATTCCTTCAAATATAGACCTTTCTTTCCCCAATGTTCAAGTATTTTGGGTTGGAAACAACTCTTTAACCGGAATTATTCCTCCCACATTTTCCAACCTCTCTCAATTGCAAATGTTGGATATAATTGGGAATCGTTTTCGGGGGCCATTTCCCAACACTTTGGGAAAACTGCAAAATCTTCATGAAATGAACATTGACTTCAATGTTTTGGGGAGTGGAAGCAGTGGTGATTTAGATTTCCTTTCATCATTGACCAACTGTAGCCAATTGCTTAAATTGAGCCTACAAGGAAATGGATTTGGTGGTGTATTGCCAAAAATGGGCTCTTCAAAGTTTCTTATAGAGAGCTACATGATGCCACCAATGGGCTCTTCTAATAAAGACCAAACTCCTTCTTCAGCAATTAAAGGAACCATTGGTTATATTCCTCCAGAATATGGAGAAGGTGGACCAGTGACAGCAAAAGGGGATATCTATAGCTATGGAGTTTTATTGTTAGAGATGCTCACTGGAAAAAAGCCTACAGATAGCATGTTTGGAGAACATCGGAGTCTGCACAAGTTTTGTAAGTTGGCATTGTCAGAAAGATCAGTCATTGAGATAGTGGACTCATGTGTGCTGATACCATCAGAAAGAGGCAACATGAAAGGGACAGAGAAGCCTAAAGGGAAACTTGAGATGCAAGAGTCTTTGATCAGCTTTGCTAAGATTGGAGTGGCGTGTTCAGTAGATTTGCCCAACGAACGGATGAGTATAAAAGATGTTCTGGTGGAGTTGCTTGCCATTAAAAAGAGGTTGTCCTCAGTTGGTATTCAACATGTCTATGCATAA 1566 0.408 MSSSQTFLPPTFAKPMGPETDRVSLLTLKEKLTNGNPQLLPSWNSSLHFCKWEGVSCSALHTRVSKLHLTDPSLDGYLAPAIGNLTFLKVLNITYTRVHGEIPKEIGRLKRLRILFLRRNNFQGEIPVQLANCSNLQFIVLNVNNLTGKAPSWLGSMRSLQSLNLDVNKFVGTIPQSLGNLSSLRILSLPGNNLQGSIPQTLGQLTSLIALGLAVNNLSGIIPSSLYNLSNIEEFDLGDNHLSGTIPSNIDLSFPNVQVFWVGNNSLTGIIPPTFSNLSQLQMLDIIGNRFRGPFPNTLGKLQNLHEMNIDFNVLGSGSSGDLDFLSSLTNCSQLLKLSLQGNGFGGVLPKMGSSKFLIESYMMPPMGSSNKDQTPSSAIKGTIGYIPPEYGEGGPVTAKGDIYSYGVLLLEMLTGKKPTDSMFGEHRSLHKFCKLALSERSVIEIVDSCVLIPSERGNMKGTEKPKGKLEMQESLISFAKIGVACSVDLPNERMSIKDVLVELLAIKKRLSSVGIQHVYA 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g1534 521 Gene3D Ribonuclease Inhibitor 18 177 IPR032675 -
Alju07g1534 521 Pfam Leucine rich repeat N-terminal domain 19 58 IPR013210 -
Alju07g1534 521 Gene3D Transferase(Phosphotransferase) domain 1 349 517 - -
Alju07g1534 521 FunFam Leucine-rich repeat receptor protein kinase EMS1 176 273 - -
Alju07g1534 521 SUPERFAMILY L domain-like 44 352 - -
Alju07g1534 521 FunFam Leucine-rich repeat receptor-like protein kinase 18 175 - -
Alju07g1534 521 Gene3D Ribonuclease Inhibitor 250 348 IPR032675 -
Alju07g1534 521 Gene3D Ribonuclease Inhibitor 180 249 IPR032675 -
Alju07g1534 521 Pfam Leucine rich repeat 134 194 IPR001611 GO:0005515
Alju07g1534 521 Pfam Leucine rich repeat 256 315 IPR001611 GO:0005515
Alju07g1534 521 Pfam Protein tyrosine and serine/threonine kinase 374 427 IPR001245 GO:0004672|GO:0006468
Alju07g1534 521 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 370 504 - -
Alju07g1534 521 SUPERFAMILY Protein kinase-like (PK-like) 376 510 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g1534 Alju-ChrAlju07 41419704 41422873 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g1534 373 511 Receptor kinase-like Gene Family AT3G47570 37.410 1.73e-22 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Alju07g1534 PK_Tyr_Ser-Thr 1.8e-05 CL0016