Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g1522 ATGGACCCCACCACTTTCTCGTCTTCATCTTTCTCAACTAAACTTGAGACCGCTTATAAATCCGTAATAATAAGTGAACCTTTCCTCATCACACTCATCACTATCTCTCATCATCGCTCTCTCTGTCTGTCACAGCACCACCACCGGAGAAAAATGGAGGGGAAGGAACAGGATGTTTCGTTGGGAGCGAACAAGTTCCCGGAGAGGCAGCCCATCGGGACGGCGGCTCAGAGCCAAGACGACGGGAAGGACTACCAGGAGCCACCACCGGCGCCACTGTTCGAACCATCTGAGCTGACGTCGTGGTCGTTTTACAGAGCCGGGATCGCCGAGTTCGTGGCCACTTTTCTGTTCCTGTACATCACCATCTTGACGGTTATGGGCGTCACTCACTCTAGTTCAAAGTGCAAAACCGTCGGAATTCAAGGAATCGCTTGGGCTTTCGGCGGCATGATCTTCGCCCTCGTGTACTGCACAGCTGGAATTTCAGGTGGTCACATAAACCCGGCGGTGACATTTGGGTTGTTCTTGGGGAGGAAGTTGTCGTTGACGAGGGCAATATTCTACATCGTGATGCAGTGCTTGGGTGCGATCTGTGGTGCAGGTGTGGTGAAGGGTTTTGAGGGCAAGAAATTCTACGGCGACAACGGCGGCGGTGTCAACTACGTGCACGACGGTTACACCAAAGGAGACGGCCTCGGTGCTGAGATTGTTGGCACCTTCATCCTTGTCTACACCGTCTTCTCCGCCACCGATGCCAAGCGTAGCGCTCGTGACTCCCACGTCCCCATTTTGGCACCGTTGCCAATTGGGTTCGCTGTGTTTTTGGTTCACTTGGCAACCATCCCCATCACTGGAACCGGTATCAACCCAGCTCGAAGTCTCGGAGCCGCCATCATCTTCAACAAACACCTTGGCTGGCATGAACACTGGATTTTCTGGGTGGGACCATTCATCGGAGCGGCACTGGCAGCACTGTACCACGTTGTGGTGATCAGGGCCATTCCCTTCAAGTCCAAGTGA 1023 0.5367 MDPTTFSSSSFSTKLETAYKSVIISEPFLITLITISHHRSLCLSQHHHRRKMEGKEQDVSLGANKFPERQPIGTAAQSQDDGKDYQEPPPAPLFEPSELTSWSFYRAGIAEFVATFLFLYITILTVMGVTHSSSKCKTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLGRKLSLTRAIFYIVMQCLGAICGAGVVKGFEGKKFYGDNGGGVNYVHDGYTKGDGLGAEIVGTFILVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKHLGWHEHWIFWVGPFIGAALAALYHVVVIRAIPFKSK 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g1522 340 Gene3D Glycerol uptake facilitator protein. 91 338 IPR023271 -
Alju07g1522 340 Pfam Major intrinsic protein 98 328 IPR000425 GO:0015267|GO:0016020|GO:0055085
Alju07g1522 340 ProSitePatterns MIP family signature. 166 174 IPR022357 -
Alju07g1522 340 CDD MIP 106 331 IPR000425 GO:0015267|GO:0016020|GO:0055085
Alju07g1522 340 PRINTS Major intrinsic protein family signature 311 331 IPR000425 GO:0015267|GO:0016020|GO:0055085
Alju07g1522 340 PRINTS Major intrinsic protein family signature 271 293 IPR000425 GO:0015267|GO:0016020|GO:0055085
Alju07g1522 340 PRINTS Major intrinsic protein family signature 235 253 IPR000425 GO:0015267|GO:0016020|GO:0055085
Alju07g1522 340 PRINTS Major intrinsic protein family signature 106 125 IPR000425 GO:0015267|GO:0016020|GO:0055085
Alju07g1522 340 PRINTS Major intrinsic protein family signature 185 204 IPR000425 GO:0015267|GO:0016020|GO:0055085
Alju07g1522 340 PRINTS Major intrinsic protein family signature 148 172 IPR000425 GO:0015267|GO:0016020|GO:0055085
Alju07g1522 340 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 64 336 IPR034294 -
Alju07g1522 340 NCBIfam MIP family channel protein 110 328 IPR000425 GO:0015267|GO:0016020|GO:0055085
Alju07g1522 340 MobiDBLite consensus disorder prediction 70 90 - -
Alju07g1522 340 SUPERFAMILY Aquaporin-like 98 332 IPR023271 -
Alju07g1522 340 FunFam Probable aquaporin PIP1-2 91 340 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g1522 Alju-ChrAlju07 41280737 41282262 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g1522 52 340 Major Intrinsic Protein MIP AT4G23400 84.083 6.09e-169 469
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju07g1522 07 41280737 41282262 Alju07g1522 07 41280737 41282262 CCT
Alju07g1522 07 41280737 41282262 Alju07g1522 07 41280737 41282262 ECH