Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g1518 ATGGAAGATGGCGTGTCAGGGTTTTGTATCAGAGCAGGAAGTTTTAGGAGAGGTGATAGTAATAATAATGGGAATAGTGGAAGTAGTGGAACTAAGTGTGGGCGTTGGAATCCGACAACAGAACAGGTTAAGCTTCTTACAGATTTGTTCATGTCTGGTCTGAGAACTCCAAGCACTGATCAGATTCAGAAGATATCCACTGAGCTTAGCTATTATGGCAAGATTGAAAGCAAGAATGTGTTTTATTGGTTTCAGAACCATAAAGCCAGGGAGAGACAGAAGCGTCGTAAGGTCTCATTCCATGACAAGGATCTTAGTAACATTCGTCGTCAAAGCTCTCTGTTATCTTACACACAACACAATTTTGGGGAGGTGGATCAAGTTCAAGAGGCAGAGAGAGTGATAGAGACTCTTGAACTGTTTCCCTTGAACTCCATTGGTGAATCAGAAGCAGAGAAAGTGAGGGGACAAGCAAATAAATATGGGGATGATGATAACGGTACGATGTTTCAGCCGTCGATGGGGGAACATATGGATAACCCAGCATTAGATTTGCGCTTAAGCTTTCTGTAA 573 0.4241 MEDGVSGFCIRAGSFRRGDSNNNGNSGSSGTKCGRWNPTTEQVKLLTDLFMSGLRTPSTDQIQKISTELSYYGKIESKNVFYWFQNHKARERQKRRKVSFHDKDLSNIRRQSSLLSYTQHNFGEVDQVQEAERVIETLELFPLNSIGESEAEKVRGQANKYGDDDNGTMFQPSMGEHMDNPALDLRLSFL 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g1518 190 Gene3D - 32 100 - -
Alju07g1518 190 CDD homeodomain 35 95 IPR001356 GO:0003677
Alju07g1518 190 SMART HOX_1 31 98 IPR001356 GO:0003677
Alju07g1518 190 ProSiteProfiles 'Homeobox' domain profile. 29 94 IPR001356 GO:0003677
Alju07g1518 190 FunFam WUSCHEL-related homeobox 11 32 100 - -
Alju07g1518 190 Pfam Homeodomain 33 93 IPR001356 GO:0003677
Alju07g1518 190 SUPERFAMILY Homeodomain-like 34 97 IPR009057 -
Alju07g1518 190 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 19 113 IPR044555 GO:0003700|GO:0099402
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g1518 Alju-ChrAlju07 41262626 41263274 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g1518 17 190 Wox Gene Family AT3G11260 56.831 2.86e-60 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Alju07g1518 Homeodomain 2.7e-17 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju07g1518 07 41262626 41263274 Alju07g1518 07 41262626 41263274 CCT
Alju07g1518 07 41262626 41263274 Alju07g1518 07 41262626 41263274 ECH