Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g1499 ATGCACATCACTCCTGCCCCACTGGAACCTGAGAAAAAAATTTCCGACCTTCTCTTCAACCTTGAGGAGTCTCGTGTTGTTGATATAGACAATGGTGGTCGGCGTAGCAGCTCCGTCGGTGACAGTGGCGATGGGGGAGGGCATCCAGACGCTGCCGACAGTGTAGATAAGGAGCAAAAATGCTCCGACGAGGTTTCTGATGCCGAGATTGTGGGAGTGCCCGAAAAAGAGAAGGGATCCCCTGCATCGGAGTGTACGGTAGAGGTGGATTTGGGGAATGTGGTGACTGAAACTAAGGTACATTTGGGTGAGGAGGTGAAGAGGGATTGCAGGATTTGCCATCTTAGTATGGATATGACCAATCATGAATCTGGGAGCATTGAGCTCGGATGTTCTTGCAAGGACGATTTGGTTGCTGCTCACAAGCAATGTGCTGAGGCTTGGTTCAAGATCAAGGGAAACAAAACCTGCGAAATCTGTGGATCAATTGCACGCAATGTAACTGGAGCTTTTGAAGTAGAAAATGTTGAACAGTGGAACGAGTCAAATGATGCCACCATGGCAGCCCCAACTGGACCTGTGTCCCATGGTGACCATAGAAGTTTTTGGAGGGGCCACAGATTCTTGAACTTCCTACTAGCCTGTATGGTCTTTGCCTTTGTCATATCTTGGCTTTTCCACTTCAATGTACCCTCATGA 699 0.4864 MHITPAPLEPEKKISDLLFNLEESRVVDIDNGGRRSSSVGDSGDGGGHPDAADSVDKEQKCSDEVSDAEIVGVPEKEKGSPASECTVEVDLGNVVTETKVHLGEEVKRDCRICHLSMDMTNHESGSIELGCSCKDDLVAAHKQCAEAWFKIKGNKTCEICGSIARNVTGAFEVENVEQWNESNDATMAAPTGPVSHGDHRSFWRGHRFLNFLLACMVFAFVISWLFHFNVPS 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g1499 232 ProSiteProfiles Zinc finger RING-CH-type profile. 102 167 IPR011016 GO:0008270
Alju07g1499 232 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 95 169 IPR013083 -
Alju07g1499 232 SMART ringv_2 109 161 IPR011016 GO:0008270
Alju07g1499 232 MobiDBLite consensus disorder prediction 29 65 - -
Alju07g1499 232 SUPERFAMILY RING/U-box 106 163 - -
Alju07g1499 232 MobiDBLite consensus disorder prediction 50 65 - -
Alju07g1499 232 Pfam RING-variant domain 110 160 IPR011016 GO:0008270
Alju07g1499 232 PANTHER ZINC FINGER, RING-CH-TYPE 35 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g1499 Alju-ChrAlju07 40942536 40944997 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g1499 44 232 C3H Transcription Factor Family AT5G05830 56.771 3.96e-65 199