Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g1445 ATGGCTGGGATTTGCTGTGGTGTTGTTGGAGAAGGTGAGACTCCGACTCCGATTGAGCCGGGACGACCTTCTCGGCGCCGGAGGTTGGATATGATGCCCTTGAAGCTTATGGCTGATGTGGCTGTGCTGCCGCCTGAGACCTGCAGCCTGAAGCGCCCAAAGCTGGATCTCTGTACTAATTCTTCCACGCAACCAAGAGACTGCGTAAACGCAGTTCAGAATTGTGAATCTAGTGGTGTTAAGAAGGAAGAGGAACAAAACGAGGAGGAACAGAAAAAGGACGAATCTCTGTCGACGGTTTCTTCGTTAAATTCAACTGATACAAAAGAGTGTGATAATGAGAATATTCGTGAGTGTCCAAAGTTTGGGGTTACATCAGTTTGTGGTAGAAGGAGGGATATGGAGGATGCTGTTTCAGTTCGTCCTTCGTTCTGCCAAGAACAGGGTCAAAATCGGAAAGAGTGTCACTACTTTGGTGTGTTCGACGGCCACGGTTGCTCTCATGTAGCGACGATCTGTAAGGAAAGGCTGCATGAGATTGTGAAGGAAGAGGTCGGTGGAGCACGAGAGGATTCGGAATGGAAGTCTACGATGGAACAGAGTTTTGCTCGCATGGACGAGGAGGTACAGAACTGGAGCCAGAGCAACCAGAGCTCCACTTGCAGGTGCGAGCTTCAGACACCCCACTGCGACGCCGTCGGATCTACCGCGGTTGTTGCCGTGGTTACACCGGACAAGATCATCGTCTCCAACTGTGGCGACTCCCGAGCCGTTCTCTGCCGAAACGGCGTCGCCGTCCCTCTTTCGTCCGATCACAAGCCGGACCGACCTGACGAGTTGCTCCGGGTTCAAGCCGCCGGAGGACGGGTCATTTACTGGGATGGTCCTAGGGTTCTCGGAGTTTTGGCGATGTCAAGAGCCATAGGCGACAATTATCTTAAACCGTACGTTATATCGGAGCCGGAGGTGACGGTGACGGAGCGAACAGACGAGGACGAATGTCTGATACTTGCGAGTGACGGCTTATGGGACGTGGTGTCAAACGATACCGCATGCGGGGTGGTGAGGATGTGCCTGAAGGTGCAGAAACCGCCGTCTCCGCCGGGATTGCCGGGAAGCGACATGGCAGTGTGCTCCGCCGCGGATGGGTCGGACAAGGCGTGCTCGGACGCATCCATTTTGTTGACTAAGCTAGCTTTGGCCCGGCATAGTACGGACAATGTGAGCGTGGTGGTGGTGGATTTGAGGAGAGATAAACCGGAATGTTACTCCGACGAGGGGAACAACGATAATAAGAACAAAAATTGA 1308 0.5329 MAGICCGVVGEGETPTPIEPGRPSRRRRLDMMPLKLMADVAVLPPETCSLKRPKLDLCTNSSTQPRDCVNAVQNCESSGVKKEEEQNEEEQKKDESLSTVSSLNSTDTKECDNENIRECPKFGVTSVCGRRRDMEDAVSVRPSFCQEQGQNRKECHYFGVFDGHGCSHVATICKERLHEIVKEEVGGAREDSEWKSTMEQSFARMDEEVQNWSQSNQSSTCRCELQTPHCDAVGSTAVVAVVTPDKIIVSNCGDSRAVLCRNGVAVPLSSDHKPDRPDELLRVQAAGGRVIYWDGPRVLGVLAMSRAIGDNYLKPYVISEPEVTVTERTDEDECLILASDGLWDVVSNDTACGVVRMCLKVQKPPSPPGLPGSDMAVCSAADGSDKACSDASILLTKLALARHSTDNVSVVVVDLRRDKPECYSDEGNNDNKNKN 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g1445 435 PANTHER PROTEIN PHOSPHATASE 94 415 IPR015655 GO:0004722|GO:0006470
Alju07g1445 435 MobiDBLite consensus disorder prediction 79 111 - -
Alju07g1445 435 SUPERFAMILY PP2C-like 120 416 IPR036457 -
Alju07g1445 435 CDD PP2Cc 121 415 IPR001932 -
Alju07g1445 435 SMART PP2C_4 109 413 IPR001932 -
Alju07g1445 435 Pfam Protein phosphatase 2C 122 387 IPR001932 -
Alju07g1445 435 ProSiteProfiles PPM-type phosphatase domain profile. 121 415 IPR001932 -
Alju07g1445 435 MobiDBLite consensus disorder prediction 79 96 - -
Alju07g1445 435 Gene3D - 116 422 IPR036457 -
Alju07g1445 435 ProSitePatterns PPM-type phosphatase domain signature. 157 165 IPR000222 GO:0043169
Alju07g1445 435 FunFam Protein phosphatase 2C 37 116 421 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g1445 Alju-ChrAlju07 40048540 40050275 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g1445 120 419 PP2C-type Phosphatase Gene Family AT1G07430 65.312 2.04e-145 420
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju07g1445 07 40048540 40050275 Alju07g1445 07 40048540 40050275 CCT
Alju07g1445 07 40048540 40050275 Alju07g1445 07 40048540 40050275 ECH