Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g1437 ATGGCGAATCGGTGGTGGGCGGGTAACGTCGCAGTGAGACCAAAAGATCCTTTGTCTTCGTCTCCATCACTTCATCTGAGAAAACCAGAGGATGACCATGGCGGGTTGAACCGGTTCGGTGCCGTTCGAATGCAAGACTTTCTGGAAAGCACCAATAACAACAACACTCCGAGCAACAGCAGCAACAGCAACACTAACCCCAACACAAACACCACCTCCCAGAGCCAGAACGCCGATGACGGTGACAGCCGAGATAACGGCCTGGAAGCTGATGATCAGAACATGGGTGGTAGCCATGACGGTTTCGAGCCCGGCAGCAAAGATCGGCGTCCCCGAGGCCGCCCTCCTGGGTCGAAGAACAAGCCGAAGCCACCAGTGGTTGTGACAAAGGAGAGTCCCAACGCCCTCCGGAGCCACGTGCTGGAGATCTCCAGCGGCAATGATGTCGCCGAGAGCCTCTCCACCTTCGCCAACCGGAGGCACCGCGGGGTGTCGGTGCTCAGCGGAAGCGGCATTGTTACCAATGTTACTCTCCGGCAACCGGCGGCACCGGGTGGGGTTATCACACTAAACGGAAGGTTTGAGATTCTGTCACTATCCGGGGCATTCTTGCCGGCCCCCTCGCCACCCGGGGCGACCGGGCTAACCGTGTACCTAGCCGGCGTGCAAGGGCAAGTTGTTGGCGGCGCCGTGGTGGGGTCACTGGTAGCATCGGGACCAGTACTGGTGATTGCAGCCACATTCGCTAATGCGACTTATGAGAGGCTACCACTTGAGGATGAGCCATCTGGGGAAGAAGTTGAAACAAAGACACCAAACCACGCAGGATTGAATAATAATAATAATAGTTCAGCAACTTCAGCTGGGCCTAATCCTTCAACACCTCAGGCTTTGAACGAACAAGTTTCGATGCCTGTGTTCAATAATTTGCCTCCAAATTTGGTGCCAAACAGTGATCATCAACAAATGCAACATGACGTGTTCTGGGGTACCCCTGCTCGCCATCCTCCTCCTTTCTGA 1020 0.5529 MANRWWAGNVAVRPKDPLSSSPSLHLRKPEDDHGGLNRFGAVRMQDFLESTNNNNTPSNSSNSNTNPNTNTTSQSQNADDGDSRDNGLEADDQNMGGSHDGFEPGSKDRRPRGRPPGSKNKPKPPVVVTKESPNALRSHVLEISSGNDVAESLSTFANRRHRGVSVLSGSGIVTNVTLRQPAAPGGVITLNGRFEILSLSGAFLPAPSPPGATGLTVYLAGVQGQVVGGAVVGSLVASGPVLVIAATFANATYERLPLEDEPSGEEVETKTPNHAGLNNNNNSSATSAGPNPSTPQALNEQVSMPVFNNLPPNLVPNSDHQQMQHDVFWGTPARHPPPF 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g1437 339 FunFam AT-hook motif nuclear-localized protein 136 263 - -
Alju07g1437 339 MobiDBLite consensus disorder prediction 272 298 - -
Alju07g1437 339 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 65 330 IPR014476 GO:0003680
Alju07g1437 339 SUPERFAMILY AF0104/ALDC/Ptd012-like 133 260 - -
Alju07g1437 339 CDD DUF296 137 219 IPR005175 -
Alju07g1437 339 PIRSF ESCAROLA 45 339 IPR014476 GO:0003680
Alju07g1437 339 Pfam Plants and Prokaryotes Conserved (PCC) domain 137 249 IPR005175 -
Alju07g1437 339 ProSiteProfiles PPC domain profile profile. 133 271 IPR005175 -
Alju07g1437 339 Gene3D - 136 268 - -
Alju07g1437 339 MobiDBLite consensus disorder prediction 257 298 - -
Alju07g1437 339 MobiDBLite consensus disorder prediction 46 81 - -
Alju07g1437 339 MobiDBLite consensus disorder prediction 1 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g1437 Alju-ChrAlju07 39979456 39980475 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g1437 1 338 AT-hook Motif Nuclear Localized (AHL) Family AT3G55560 52.047 7.26e-75 231