Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g1436 ATGGCGAATCGGTGGTGGGCTGGGAACGTGGCAATGAGACCGAAAGATCCCTTATTGTCTTCTCCATCACTTCAGCTGAGGAACCCAGAAGATGACCATGGCGGATTGAGTCGACTCGGTCCAAGACGCGAGCAAGACTTTCTTCTGGAAAACACCAATAACAACACCACCACCACTACTCCAACCAATAGTAGCAATAGCAACACTAACGCCAACACAAACACCACCTCCCAGAGCCAGAACGTCGGCGACGATGACGAGAGCCGACACAACGATGATCAAAACCCAGGTACCCAAGACGCCGCCGAGCCAGGGAGCAGCGGCGGCCGACGTCCCCGAGGCCGCCCGCCCGGGTCGAAGAACAAGCCCAGGGCACCGGTGGTGCTAACGAAGGAGAGCCCCAATGCCCTCCGGAGCCACGTGTTGGAAATCTCAAGCGGCAGCGATGTCGCCGAGAGCCTCTCCACCTTCGCGAACCGGCGCCACCGTGGCGTGTCGGTGCTCAGCGGAAGCGGCATTGTAACCAATGTCACACTCCGGCATCCGTCAGCTCCTGGTGGGGTTATCACACTAAACGGAAGGTTCGAGATTCTGTCACTATCCGGGGCATTTTTGCCGGCACCTTCACCGACCGGGGCCACCGGGCTAACCGTGTACCTCGCTGGAGGACAAGGGCAGGTTGTTGGTGGGAATGTGGTGGGTTCACTGGTAGCATCAGGGCCAGTACTGGTGATTGCAGCCACATTCGCTAATGCAACTTATGAGAGGTTGCCTCTTGAGGATAATGAGCCATCTGGGGAAGAAGTTGAAGTACAACAAGCACAACAGCAACAACAATCAGCAACTTCTGGGCCTTCAGCTTCTCAAAGTTTGAATGAACAAGTTTCAATGCCAATGTTCAATAATATGCCCCCAAATTTGATGCCAAGTAATGATCACATGCCTCATGATTTGTTCTGGGCGCCTCCAGTTCGCCAACCTCCACCTTACTGA 993 0.5498 MANRWWAGNVAMRPKDPLLSSPSLQLRNPEDDHGGLSRLGPRREQDFLLENTNNNTTTTTPTNSSNSNTNANTNTTSQSQNVGDDDESRHNDDQNPGTQDAAEPGSSGGRRPRGRPPGSKNKPRAPVVLTKESPNALRSHVLEISSGSDVAESLSTFANRRHRGVSVLSGSGIVTNVTLRHPSAPGGVITLNGRFEILSLSGAFLPAPSPTGATGLTVYLAGGQGQVVGGNVVGSLVASGPVLVIAATFANATYERLPLEDNEPSGEEVEVQQAQQQQQSATSGPSASQSLNEQVSMPMFNNMPPNLMPSNDHMPHDLFWAPPVRQPPPY 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g1436 330 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 69 321 IPR014476 GO:0003680
Alju07g1436 330 SUPERFAMILY AF0104/ALDC/Ptd012-like 134 262 - -
Alju07g1436 330 MobiDBLite consensus disorder prediction 47 82 - -
Alju07g1436 330 MobiDBLite consensus disorder prediction 1 128 - -
Alju07g1436 330 MobiDBLite consensus disorder prediction 268 308 - -
Alju07g1436 330 PIRSF ESCAROLA 51 330 IPR014476 GO:0003680
Alju07g1436 330 MobiDBLite consensus disorder prediction 260 310 - -
Alju07g1436 330 ProSiteProfiles PPC domain profile profile. 134 273 IPR005175 -
Alju07g1436 330 MobiDBLite consensus disorder prediction 31 45 - -
Alju07g1436 330 CDD DUF296 138 221 IPR005175 -
Alju07g1436 330 FunFam AT-hook motif nuclear-localized protein 137 264 - -
Alju07g1436 330 Pfam Plants and Prokaryotes Conserved (PCC) domain 138 250 IPR005175 -
Alju07g1436 330 Gene3D - 137 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g1436 Alju-ChrAlju07 39936421 39937413 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g1436 1 330 AT-hook Motif Nuclear Localized (AHL) Family AT3G55560 50.737 7.14e-77 236
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju07g1436 07 39936421 39937413 Alju07g1436 07 39936421 39937413 CCT
Alju07g1436 07 39936421 39937413 Alju07g1436 07 39936421 39937413 ECH