Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g1429 ATGCAAAAGTACATGGTTAGGACAACGACAGGGCTTGGCTCATCATGTGGAGCATGCAAATTCCTGCGGAGAAAGTGTACTGCTGATTGCATATTTGCTCCTTACTTCTCCTATGACCAGGCTGCTACCCATTTCGCAGCAGTGCACAAGGTTTTTGGTGCAAGTAATGCCTCTAGGCTACTGCTACACCTACCGGTGCAGAGTAGAAGCGATGCAGCCATCACTGTGTCTTACGAGGCACTCGCTCGGATGCACGATCCGATATATGGTTGTGTTGCTCAAATCTTTGCCCTGCAGCAACAGGTTGCAAGCTTGCAAGAGGAAATAGATAAACTTGGTACTATGATGGCCAACTCTCCTGTTGGCGCTGCCATTTCTGGTGGCAGTTCTCAGGCCTCGACAAGCAGAAACACGGACAGGATTGATTTTTCTTGGCAGCAAGATGCAACAAATATGCAACTTTATCAGACTCAACTATCTACTCTGCTTTCTCACCAAGCAAGTGCTGCTGCAGCATACCAAGGCTTGGAAGGACAGGTGAATTGGGACTTTCCAGATGCTCTTCAATTTGAAGACCATGTATTTGATGAGTCTGACCCTAATTCATTAGAGAAGCTCCTATCAGGAATTGACCAACAGGTTTTCATCAATTATCCTTGGACCTAA 666 0.464 MQKYMVRTTTGLGSSCGACKFLRRKCTADCIFAPYFSYDQAATHFAAVHKVFGASNASRLLLHLPVQSRSDAAITVSYEALARMHDPIYGCVAQIFALQQQVASLQEEIDKLGTMMANSPVGAAISGGSSQASTSRNTDRIDFSWQQDATNMQLYQTQLSTLLSHQASAAAAYQGLEGQVNWDFPDALQFEDHVFDESDPNSLEKLLSGIDQQVFINYPWT 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g1429 221 Coils Coil 95 115 - -
Alju07g1429 221 Pfam Lateral organ boundaries (LOB) domain 15 111 IPR004883 -
Alju07g1429 221 ProSiteProfiles LOB domain profile. 14 116 IPR004883 -
Alju07g1429 221 PANTHER LOB DOMAIN CONTAINING PROTEIN 11 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g1429 Alju-ChrAlju07 39840702 39841440 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g1429 13 118 AS2 family AT5G06080 73.585 5.78e-57 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Alju07g1429 LOB 2.8e-34 No_clan