Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g1417 ATGAAGAAGAAGAGAGAACCCTGTAACTGTACATGGCTTTTGTGGTGGCAAGCAAGGGAAAGGGGACTTCTTCTCAACGTAGTCATCACATTTGTATTTTCTTTAGCTTATAGCTTCAGGTCATGTTTCAAGCTGATTAAAAAATTTGATGTTGATAATATATATATAAAAGTATACATATTATCTTGTACACTTCAACACCAAACTCTCTGTGACTCTCCTACCAAAATCAAAGCAATCCATTCCGTTGTCGACCTCCATGCGGCCCTAGGAATACCAGCTCAAGGTGCAATTCTTCAATCCAAGCACAGGTATTCTGAGATCTTAGATATTGTCAGCTTGATTCACGACCTGGGAAGAGAAGGTGTCGGTGGATTTGTGGGTGCTCTATCATCATTGAAGATTTCACAAAGCATTAAATCGGTTTCCCTTCGTAATCAAACGCTTGCGTTAACTAGTGGAGTCTCAATTCAATTTTCCCAAGCAAGTAGAGCCATGAGTTTTGTTTTGAGAGGAACAAGAGCAGACATAGAAACTGGATTTCCTGGATTTATTCCTGAGAGGCATGGATTGCGTGTTCATGCAGCACGGCCTACCAATTCCAATTCACTTACTTTTCTTGTCACAGTTCTCCTGTTATTCATGATTCTGAACTCTCACCAGATGTCACCAAATTTTCTGCTTTGGCTCGTGCTAGGAGTCTTCTTGATGGCCACAATGTTAAGGATGTATGCAACTTGTCAGCAGCTTCAAGCTGAGGCTCATGCCCATGCAGCAGCAGGCAGTGGTGGCCTTCTTGGGCACACTGAAGTACGTTTGCACATGCCACCATCAATGGCACTTACCACCCGAGGACGTCTACAGGGCCTTAGACTCCAGCTTGCACTTCTTGATCGGGAGTTTGATGATCTAGATTATGAAACTTTAAGAGCGCTGGATTCAGATAATGCTCCGCCTGCACCTTCTATGACTGATGAAGAGATAAATGCTCTTCCTGTTCACAAATACAAGGGTTCTGGTCTCCAAAACAGGAAATCCTCAATGCAACAGACCTCATCTTCCACCTTTGCTGAGAAGAAGCAAGATACATCAAATGCAGTTGGTAGTACAAAAGGCTCTGATGATGAGCTGACGTGCAGTGTATGTTTGGAGCAAGTTAACGTTGGGGATCTACTCCGCAGCTTGCCCTGCTTACATCAGTTTCATGCCAATTGCATCGACCCATGGCTGCGGCAACAAGGAACATGTCCTGTATGTAAGTTCAGAGCAGGATCTACGTGGCATGAGGGTGAACAGAATGAAGTTGATGCTTCAGACATGGCTTGGGGTTTAACTTTGGACTTAATCTCGGAGATGAAGAGTTGCAATGAAACATTTTCTTGTGTAAACTGTAAATGA 1398 0.4342 MKKKREPCNCTWLLWWQARERGLLLNVVITFVFSLAYSFRSCFKLIKKFDVDNIYIKVYILSCTLQHQTLCDSPTKIKAIHSVVDLHAALGIPAQGAILQSKHRYSEILDIVSLIHDLGREGVGGFVGALSSLKISQSIKSVSLRNQTLALTSGVSIQFSQASRAMSFVLRGTRADIETGFPGFIPERHGLRVHAARPTNSNSLTFLVTVLLLFMILNSHQMSPNFLLWLVLGVFLMATMLRMYATCQQLQAEAHAHAAAGSGGLLGHTEVRLHMPPSMALTTRGRLQGLRLQLALLDREFDDLDYETLRALDSDNAPPAPSMTDEEINALPVHKYKGSGLQNRKSSMQQTSSSTFAEKKQDTSNAVGSTKGSDDELTCSVCLEQVNVGDLLRSLPCLHQFHANCIDPWLRQQGTCPVCKFRAGSTWHEGEQNEVDASDMAWGLTLDLISEMKSCNETFSCVNCK 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g1417 465 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 319 424 IPR013083 -
Alju07g1417 465 PANTHER TARGET OF ERK KINASE MPK-1 166 425 - -
Alju07g1417 465 SMART ring_2 379 419 IPR001841 -
Alju07g1417 465 SUPERFAMILY RING/U-box 374 423 - -
Alju07g1417 465 MobiDBLite consensus disorder prediction 339 371 - -
Alju07g1417 465 ProSiteProfiles Zinc finger RING-type profile. 379 420 IPR001841 -
Alju07g1417 465 CDD RING-H2_PA-TM-RING 378 420 - -
Alju07g1417 465 MobiDBLite consensus disorder prediction 340 371 - -
Alju07g1417 465 Pfam Ring finger domain 378 420 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g1417 Alju-ChrAlju07 39700171 39720796 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g1417 166 440 C3H Transcription Factor Family AT3G55530 73.551 4.12e-134 386
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju07g1417 07 39700171 39720796 Alju07g1417 07 39700171 39720796 ECH