Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g1413 ATGCCTTTCATCTCGCAATTTCAACGTCAGTCTGATTACAATCTCTTCAGTCCCACCACTCCGATCGTCATTGACAATGGCGCATCTTATTTTCGTATCGGATGGGCAGGAGAGACTGAACCTCGTGTTGTTTTCCGCAACATTGTGCAAAGGCCACGCCATAAAGTCACCGGTGAAACTGTCACTATTGTTGGTGATCACAATCCAGCATTAATGAAATACTTTGACTGCACTCGCTCTGGACCACGCTCAGCATTTGATAGCAATGTTGTTTATCAGTTTGAAATAATGGAATACATTCTTGACTTTGGCTTTGACCGGATGGGTGCAAATGGATCAGAGATTGATCATCCTGTCCTGATTACAGAATGTGTGTGTAATCCAGTTCAGTCTCGTAGTAAAATGGCAGAACTTCTTTTTGAGACTTATGGTGTTCCATCAATAGCCTTTGGGGTTGATGCAGCATTCAGCTACAAGTATAATCAACACCATGGAGTTTGCAATAAAGATGGTCTTGCTATGTGTCCTGGATTTACCACAACCCATGTGATTCCGTTTGTAGATGGGGAACCTGCTTATAAAGGATGCTGCCGTACAAATATTGGTGGCTTCCATGTAACTGATCATTTGAAGCAACTTCTTTCACTTAAATATCCCTACCATTTGGCTAGATTTACATGGGAAAAGGTTGAAGACCTGAAGATGGAACATTGTTACATTGCACAGGATTATGCGTCTGAAGTTCAGCTGTTTCAGAGAGGAGGGAAGGAAGCTGAAGAGAAAACCAGATGTTGGCAGCTCCCTTGGGTTCCGCCACCAACTGAGGAGCCTCCTTCTGAGGAAGAGATTGCAAGAAAGGCAGCAATTAGAGAGAAACAAGGTCAAAGGTTGCGAGAAATGGCTGAGGCAAAGAGATCATCCAGAATAAATGAATTGGAAAATGAGTTGCATGGCTTGGAGTTTCTCTTACAACAGATTGAGCAAGTAGAAGAGAGTGACATTCCATCTTTCCTATCAGACACTGGCTATGTCTCTAAGCAGGAGATAGAATCTGCCCGATCCAAAGTTACACAATCTTTACGGAAAGCAAAAGGTGAACCAAAGAGTGATCAAGGTGAAACTGAAAAGGCTGACTCCACTAATAGCGAGAAGTATTCTCTTATAAACATCCCCGATGAAACACTAACACCAGAACAGCTTGTTGAAAAGAAGAAGCAGCTATCACTCAAGTCCATGTCTGAAGGGCGGCAGCGATCAAAGCAGAAACGCTATGAGGAGGAAATGCAACGAGAGAGGAGGTTACAGCTAGAGGAGGAGAAACGCCTAGAGAACCCAGAGCTGTACCTGGAGCAATTGCATGCTAAATACAAAGATCTATCAGAAAAAGTTGACCAACGAAAAAGACTCAAGACAAATGGAAACCACACAAATGGAAACAATTTGTCTGGTGGTGTTGGCCGTGGCGAGAGGCTAAATGCTGCTCAAAGGGAAAGAATGCGCTTGTTGACAACTGCAGCCTTCGATCGTGGTAAAGGTGAGGATACATTTGGCGCCAGAGATGAGGACTGGCACCTTTACAAATTGATGAGTAGGGATAATGATGATGACGACGAGGGTCCCGACGAGGATGAGGCAGAACTGGCCCGCATCTCTTCTAGGCTCCAGGATTTGGATCCCACATTTGTACCCAAGTTAGAAACTGGTAATGCACAATCTGCTGAGGCAGTGCCACGTTCTCGACCTCTCACGAAAGAGGATTTCCAGATCATGTTTGGGGTCGAAAGATTCAGATGCCCGGAGATTTTGTTCAATCCAAACTGGATCGGGGTTGATCAGGTAGGGTTAGACGAGATGGCCGGGGTGTCGATAAGGCGGTTGGCGGACAAGGATGAAAGTTTGGAAGAGAAACTAACTGATTCCATACTTGTGACTGGTGGGAGTTGTGTGTTTCCCGGTATCATCGAACGCCTTGAAGCTGGGATTAGGATGATCAGACCCTGCGGATCACCCATAAGAATAGTGAGAGCATTGGATCCAGTTTTGGATGCATGGAGGGGTGCTTCTGCTTATGCCTCAGCTTCTCTGTTTCACGCACAAACTTTCAGTAGGGCGGATTATTATGAGAAGGGTGAAGATTGGCTTCGTAGTTATCAACTCCAATATACATTGTAG 2172 0.4494 MPFISQFQRQSDYNLFSPTTPIVIDNGASYFRIGWAGETEPRVVFRNIVQRPRHKVTGETVTIVGDHNPALMKYFDCTRSGPRSAFDSNVVYQFEIMEYILDFGFDRMGANGSEIDHPVLITECVCNPVQSRSKMAELLFETYGVPSIAFGVDAAFSYKYNQHHGVCNKDGLAMCPGFTTTHVIPFVDGEPAYKGCCRTNIGGFHVTDHLKQLLSLKYPYHLARFTWEKVEDLKMEHCYIAQDYASEVQLFQRGGKEAEEKTRCWQLPWVPPPTEEPPSEEEIARKAAIREKQGQRLREMAEAKRSSRINELENELHGLEFLLQQIEQVEESDIPSFLSDTGYVSKQEIESARSKVTQSLRKAKGEPKSDQGETEKADSTNSEKYSLINIPDETLTPEQLVEKKKQLSLKSMSEGRQRSKQKRYEEEMQRERRLQLEEEKRLENPELYLEQLHAKYKDLSEKVDQRKRLKTNGNHTNGNNLSGGVGRGERLNAAQRERMRLLTTAAFDRGKGEDTFGARDEDWHLYKLMSRDNDDDDEGPDEDEAELARISSRLQDLDPTFVPKLETGNAQSAEAVPRSRPLTKEDFQIMFGVERFRCPEILFNPNWIGVDQVGLDEMAGVSIRRLADKDESLEEKLTDSILVTGGSCVFPGIIERLEAGIRMIRPCGSPIRIVRALDPVLDAWRGASAYASASLFHAQTFSRADYYEKGEDWLRSYQLQYTL 723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g1413 723 Pfam Actin 588 715 IPR004000 -
Alju07g1413 723 Pfam Actin 19 268 IPR004000 -
Alju07g1413 723 Gene3D - 613 682 - -
Alju07g1413 723 Gene3D Actin; Chain A, domain 4 203 253 - -
Alju07g1413 723 PANTHER ACTIN 21 711 IPR004000 -
Alju07g1413 723 SUPERFAMILY Actin-like ATPase domain 170 716 IPR043129 -
Alju07g1413 723 Gene3D Actin; Chain A, domain 4 518 612 - -
Alju07g1413 723 Gene3D - 683 711 - -
Alju07g1413 723 SUPERFAMILY Actin-like ATPase domain 19 159 IPR043129 -
Alju07g1413 723 MobiDBLite consensus disorder prediction 354 428 - -
Alju07g1413 723 Coils Coil 449 469 - -
Alju07g1413 723 SMART actin_3 19 719 IPR004000 -
Alju07g1413 723 MobiDBLite consensus disorder prediction 397 428 - -
Alju07g1413 723 MobiDBLite consensus disorder prediction 355 380 - -
Alju07g1413 723 Gene3D - 176 202 - -
Alju07g1413 723 Coils Coil 309 332 - -
Alju07g1413 723 FunFam Actin-related protein 5 203 257 - -
Alju07g1413 723 FunFam ARP5 actin-related protein 5 homolog 613 682 - -
Alju07g1413 723 Coils Coil 421 441 - -
Alju07g1413 723 CDD NBD_sugar-kinase_HSP70_actin 22 202 - -
Alju07g1413 723 FunFam Putative actin-related protein 5 683 711 - -
Alju07g1413 723 Gene3D - 19 446 - -
Alju07g1413 723 FunFam Actin-related protein 5 18 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g1413 Alju-ChrAlju07 39584276 39589745 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g1413 589 710 Cytoskeleton Gene Families AT3G46520 34.426 6.74e-16 78.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju07g1413 07 39584276 39589745 Alju07g1413 07 39584276 39589745 CCT
Alju07g1413 07 39584276 39589745 Alju07g1413 07 39584276 39589745 ECH