Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g1409 ATGATAATTGCGTCCCACAATTTCCCCATTTTCTTCGGCAAAAAAAAAAAAAAAATCACTTTTCTTCCCTCCCCTGCCTCCATAAATACCCCTGCTTCCTCTGTTTTCCTCCTCAACAAACACATTTCACACTCTCTGCAATCCCAAGAGCTACTAGCTTTGACCCCATCAATGGCTCTTCCCACTCTCTTCGCCATTGTTTCTCTTATAGCTTCTCTGTCCGTCACCGACGCTAAAATTCCCGGCGTCTACTCCGGTGGAGAGTGGGAGAACGCCCACGCTACTTTCTACGGCGGCAGCGATGCATCCGGCACCATGGGAGGAGCGTGTGGTTATGGGAATTTGTATAGCCAAGGTTATGGAGTCAACACGGCGGCGCTGAGCACAGCTCTGTTCAACAATGGCTTGAGCTGTGGGGCTTGCTTTGAGATCAAGTGTGGTAGCGACCCACAATGGTGCCATCCCGGCAGCCCGTCGATCTTCGTGACGGCGACCAACTTTTGCCCTCCTAACTTCGCTCTTCCCAGTGACAATGGCGGCTGGTGCAACCCCCCACGGCCACACTTTGACCTCGCCATGCCGATGTTCCTCAAGATCGCCGAGTACCGCGCCGGCATCGTCCCTGTCTCTTACCGCCGGGTACCTTGCCGGAAAGCTGGAGGGATTAGGTTTACGATAAACGGATTCAAATACTTCAACCTGATTCTGATAACGAACGTGGCCGGAGCAGGGGATATAGTGAGGGTGAGCGTGAAGGGGTCGAAGGCGGAGTGGATGAGCATGAGCCGTAATTGGGGTCAGAACTGGCAATCCAACGCCGTCCTGGTTGGTCAGTCTCTGTCCTTCAGGGTCACCGGCAGCGACCGCCGTACCTCCACCTCCTGGAACATCGTCCCTTCCAACTGGCAATTTGGTCAAACCTTCACCGGAAAGAACTTCAGGGTCTGA 948 0.538 MIIASHNFPIFFGKKKKKITFLPSPASINTPASSVFLLNKHISHSLQSQELLALTPSMALPTLFAIVSLIASLSVTDAKIPGVYSGGEWENAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFEIKCGSDPQWCHPGSPSIFVTATNFCPPNFALPSDNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKAGGIRFTINGFKYFNLILITNVAGAGDIVRVSVKGSKAEWMSMSRNWGQNWQSNAVLVGQSLSFRVTGSDRRTSTSWNIVPSNWQFGQTFTGKNFRV 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g1409 315 SUPERFAMILY Barwin-like endoglucanases 88 239 IPR036908 -
Alju07g1409 315 SUPERFAMILY PHL pollen allergen 219 310 IPR036749 -
Alju07g1409 315 Pfam Expansin C-terminal domain 222 299 IPR007117 -
Alju07g1409 315 SMART dpbb_1 124 211 IPR007112 -
Alju07g1409 315 Pfam Lytic transglycolase 124 211 IPR009009 -
Alju07g1409 315 FunFam Expansin 78 217 - -
Alju07g1409 315 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 231 310 IPR007117 -
Alju07g1409 315 FunFam Expansin 221 313 - -
Alju07g1409 315 PRINTS Expansin signature 160 170 IPR002963 GO:0009664
Alju07g1409 315 PRINTS Expansin signature 196 209 IPR002963 GO:0009664
Alju07g1409 315 PRINTS Expansin signature 220 232 IPR002963 GO:0009664
Alju07g1409 315 PRINTS Expansin signature 267 288 IPR002963 GO:0009664
Alju07g1409 315 PRINTS Expansin signature 296 312 IPR002963 GO:0009664
Alju07g1409 315 PRINTS Expansin signature 146 157 IPR002963 GO:0009664
Alju07g1409 315 PRINTS Expansin signature 119 133 IPR002963 GO:0009664
Alju07g1409 315 PRINTS Expansin signature 179 196 IPR002963 GO:0009664
Alju07g1409 315 PRINTS Expansin signature 232 253 IPR002963 GO:0009664
Alju07g1409 315 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 107 221 IPR007112 -
Alju07g1409 315 Gene3D - 74 217 IPR036908 -
Alju07g1409 315 Gene3D - 221 313 IPR036749 -
Alju07g1409 315 CDD DPBB_EXPA_N 88 216 - -
Alju07g1409 315 PANTHER EXPANSIN-A15 72 313 IPR002963 GO:0009664
Alju07g1409 315 PRINTS Expansin/Lol pI family signature 128 146 IPR007118 GO:0005576
Alju07g1409 315 PRINTS Expansin/Lol pI family signature 106 124 IPR007118 GO:0005576
Alju07g1409 315 PRINTS Expansin/Lol pI family signature 258 272 IPR007118 GO:0005576
Alju07g1409 315 PRINTS Expansin/Lol pI family signature 204 220 IPR007118 GO:0005576
Alju07g1409 315 PRINTS Expansin/Lol pI family signature 296 310 IPR007118 GO:0005576
Alju07g1409 315 PRINTS Expansin/Lol pI family signature 88 103 IPR007118 GO:0005576
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g1409 Alju-ChrAlju07 39522168 39524007 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g1409 57 315 Expansin Gene Family AT2G39700 83.012 4.41e-166 460
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju07g1409 07 39522168 39524007 Alju07g1409 07 39522168 39524007 CCT
Alju07g1409 07 39522168 39524007 Alju07g1409 07 39522168 39524007 ECH