Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g1402 ATGGGTTGCTGCTTCAGTGCGAGGATCAAAGCTGAAAGCCCCCCGCGAAAGGATAGGAACTCAAGCCATGACAGCAAAGAAGAGGATGGTTTGATGGGTGGAAGCAGCAAGTTCACCACTTCGACGGTGCCTCCAACTCCAAAACCTCGAACAGAGGGTGAGATCTTGCAGTCTTCCAATTTGAAAAATTTCACATATAATGAGCTAAGAACAGCTACAAGGAACTTTCGTCCGGACAGTATGGTGGGCGAAGGCGGTTTTGGTGGCGTATTTAAGGGTTGGCTTGATGAGCAGACACTTGCACCTGCTAAACCTGGCACTGGGATAGTCATTGCTGTCAAGAAGCTTAACCAAGAAGGCTTCCAGGGACACAATGAGTGGTTGACAGAGATAAATTTTCTGGGGCAGCTGCATCATCCTAACCTTGTAAAATTGATTGGCTACTGCTTAGAGGATGAGCACCGGCTTTTGGTATATGAGTTTTTGACCAAAGGCAGCTTGGATAATCATTTATTTCGAAGGACGAATCATGTTGAACCGCTTTCTTGGAGCAACCGCATGAAAATTGCCCTTGATGCTGCAAAGGGTGTTGCATTTCTTCATAGTGATGGAGTAAAAGTGATATATCGAGACCTAAAAGCTTCTAATATCTTGCTTGATTCAAACTTCAATGCAAAGCTATCTGATTTCGGATTGGCAAAGGACGGACCATCCAGTGATAGGAGCCATGTCTCTACAAGGGTCATGGGCACATACGGCTATGCTGCTCCTGAGTATATGGCCACAGGTCACCTGACCAAGAAGAGTGATGTCTACACGTTCGGGGTTGTTCTGCTCGAAATTATGTCAGGCAAACGTGCATTGGACAGAAACAGGCCAGGCAGGGAACAGAATTTAGTGGAATGGGCCAAGCCGTACCTTTCGAGCAAGCGCCGGATTTTCCAAGTTATGGATGCTCGTATCGAAGGCCAGTACCTGGTACGTGAAGCCATGAAAGTAGCAAAAATCGCGATCCAATGCCTGTCTGTAGAACCCCGGTTCAGACCAACCATGGCCGACGTGGTAAGAGCATTGGAACAGCTTCAGGATTCGAGCGATACAGGCAGCACAAGCAGCAGCAGTACTGTTCCTAAGCAGCATAAGAGAAGTTCGAACGAGTCTTTAAATGGGGCTGACACTTCTGAGTCCAGATAG 1194 0.4732 MGCCFSARIKAESPPRKDRNSSHDSKEEDGLMGGSSKFTTSTVPPTPKPRTEGEILQSSNLKNFTYNELRTATRNFRPDSMVGEGGFGGVFKGWLDEQTLAPAKPGTGIVIAVKKLNQEGFQGHNEWLTEINFLGQLHHPNLVKLIGYCLEDEHRLLVYEFLTKGSLDNHLFRRTNHVEPLSWSNRMKIALDAAKGVAFLHSDGVKVIYRDLKASNILLDSNFNAKLSDFGLAKDGPSSDRSHVSTRVMGTYGYAAPEYMATGHLTKKSDVYTFGVVLLEIMSGKRALDRNRPGREQNLVEWAKPYLSSKRRIFQVMDARIEGQYLVREAMKVAKIAIQCLSVEPRFRPTMADVVRALEQLQDSSDTGSTSSSSTVPKQHKRSSNESLNGADTSESR 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g1402 397 MobiDBLite consensus disorder prediction 1 53 - -
Alju07g1402 397 PANTHER OS01G0588500 PROTEIN-RELATED 29 362 - -
Alju07g1402 397 SUPERFAMILY Protein kinase-like (PK-like) 46 358 IPR011009 -
Alju07g1402 397 FunFam Serine/threonine-protein kinase BIK1 44 161 - -
Alju07g1402 397 MobiDBLite consensus disorder prediction 34 53 - -
Alju07g1402 397 SMART serkin_6 76 361 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju07g1402 397 MobiDBLite consensus disorder prediction 360 397 - -
Alju07g1402 397 MobiDBLite consensus disorder prediction 11 31 - -
Alju07g1402 397 ProSitePatterns Protein kinases ATP-binding region signature. 82 115 IPR017441 GO:0005524
Alju07g1402 397 FunFam Serine/threonine-protein kinase PBS1 162 376 - -
Alju07g1402 397 ProSitePatterns Serine/Threonine protein kinases active-site signature. 207 219 IPR008271 GO:0004672|GO:0006468
Alju07g1402 397 Gene3D Phosphorylase Kinase; domain 1 51 161 - -
Alju07g1402 397 Pfam Protein tyrosine and serine/threonine kinase 80 358 IPR001245 GO:0004672|GO:0006468
Alju07g1402 397 ProSiteProfiles Protein kinase domain profile. 76 361 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju07g1402 397 Gene3D Transferase(Phosphotransferase) domain 1 162 386 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g1402 Alju-ChrAlju07 39415016 39417852 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g1402 1 371 Glycoside Hydrolase AT3G07070 45.812 3.33e-107 320
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Alju07g1402 PK_Tyr_Ser-Thr 3.2e-48 CL0016