Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g1396 ATGAGAAAGCCTTGCTGTGACAAAGAAGACACCAACAAAGGAGCTTGGTCTAAACAAGAAGACCAAAAGCTCATCGATTACATCCAAACTCATGGTGAAGGTTGCTGGCGTTCCCTTCCCCAAGCTGCAGGGCTGCATCGTTGTGGAAAGAGTTGCAGGTTGAGATGGATAAATTATCTGAAGCCAGACATCAAACGTGGAAACTTTGCCCAAGACGAAGAAGACCTCATCATCAAGCTCCATGCCCTCCTCGGCAACCGGTGGTCCCTGATAGCTGGAAGGTTGCCTGGAAGAACAGATAATGAAATAAAGAACTATTGGAATTCTCACATCCGCAGAAAGCTAATAAAGATGGGCATAGATCCTGAGAACCATAAGCTTATTCATCTTCATCATCCTTCTTCTTCTTCTGCTACTGCTGCAACGTCCATGGAGAAAAAACCTAACTCCAACAACTTGAATCTTGACCTCACTATTGCTTTTGATCCTTCTAGCACACCAAACCCAAACTCTGCTGAGTCCTCTCTCAATAATAATAATAATAATAAGGAAATGGATCATCAGAGCCAATCAGCTCCAACTCTTCCTCTATTTAACTAG 600 0.4333 MRKPCCDKEDTNKGAWSKQEDQKLIDYIQTHGEGCWRSLPQAAGLHRCGKSCRLRWINYLKPDIKRGNFAQDEEDLIIKLHALLGNRWSLIAGRLPGRTDNEIKNYWNSHIRRKLIKMGIDPENHKLIHLHHPSSSSATAATSMEKKPNSNNLNLDLTIAFDPSSTPNPNSAESSLNNNNNNKEMDHQSQSAPTLPLFN 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g1396 199 FunFam MYB-related transcription factor 12 65 - -
Alju07g1396 199 SUPERFAMILY Homeodomain-like 11 107 IPR009057 -
Alju07g1396 199 CDD SANT 68 111 IPR001005 -
Alju07g1396 199 ProSiteProfiles Myb-like domain profile. 61 111 IPR001005 -
Alju07g1396 199 FunFam MYB transcription factor 67 128 - -
Alju07g1396 199 Pfam Myb-like DNA-binding domain 13 60 IPR001005 -
Alju07g1396 199 Pfam Myb-like DNA-binding domain 66 110 IPR001005 -
Alju07g1396 199 CDD SANT 15 60 IPR001005 -
Alju07g1396 199 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 8 60 IPR017930 -
Alju07g1396 199 Gene3D - 13 65 - -
Alju07g1396 199 ProSiteProfiles Myb-like domain profile. 8 60 IPR001005 -
Alju07g1396 199 MobiDBLite consensus disorder prediction 133 199 - -
Alju07g1396 199 Gene3D - 67 151 - -
Alju07g1396 199 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 61 115 IPR017930 -
Alju07g1396 199 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 184 - -
Alju07g1396 199 SMART sant 12 62 IPR001005 -
Alju07g1396 199 SMART sant 65 113 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g1396 Alju-ChrAlju07 39316461 39318053 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g1396 2 160 MYB Transcription Factor Family AT4G38620 66.038 4.44e-77 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Alju07g1396 Myb_DNA-binding 1.8e-14 CL0123