Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g1391 ATGGACATTTCTCCTTCCTCCTCGTCTTCCTCCTCCTCCGGCGCTCTCAGTCCCGACGCCAGTCTCGATGCCGACACCCCCCGAACCCCCCTTGCCGTCCGGCGAGCCCTCCAGCTTCTCCAATCTGACGATCCCGATTTTAAGCTCCAAGCCGCTCGTGATATTCGCCGCCTCACTAAAACCTCACAGCGTTGTCGCCGCCAGCTCTCTCAAGCTGTCGGTCCCCTCGTTTCCATGCTCCGACTCGACTCGTCCGAGTCTCACGAACCTGCTCTTCTTGCTTTGCTCAACCTTGCCGTCAAAGACGAAAAGAACAAAATCAGCATTGTGGAGGCTGGTGCTTTAGAACCGATAATTTCTTTCCTCAAATCACAAAATACAAACCTGCAAGAGTGCGCCACTGCATCGTTGCTCACTTTATCCGCCTCTGCTACCAACAAACCAATCATTTGTGCTTCTGGAGCCATTCCTCTTCTTGTGGAGATCCTCAGAGATGGAAGCCAACAAGCTAAAGCTGATGCAGTAATGGCTCTTTCCAATTTATCCACCCGCCCTGACAATCTCTGCGCGATTCTTGAAACAAACCCAATCCCTTTCATAGTTGATCTTCTCAAAACCTGTAAAAAGTCCTCAAAAACAGCCGAGAAGTGCTGTGCTTTGATAGAATCCTTGGTGGGTTTTGATGAGGGCAGGACCGCCTTGACATCCGAGGAAGGCGCAGTCCTTGCAGTCATCGAAGTTCTTGAAAATGGCAATCTCCAGAGCAGGGAGCACGCTGTTGGAGCGCTGTTGACAATGTGTGAAAGCGACCGATGTAAATACAGGGAACCGATTCTCCGAGAAGGCGTAATCCCAGGACTTCTGGAGCTTACCGTTCAGGGAACACCCAAGTCGCAGTTAAAAGCCCGCAACCTCTTGCAGCTACTGAGAGAAACACCTTATCCGAGATCTGAAATTCAACCAGACACACTTGAGAACATAGTATGCAATATCATATCCCAGATTGATGGGGATGATCAGTCTGGTAAAGCAAAGAAGATGCTAGCTGAGATGGTCCAAGTCAGCATGGAACAGAGTCTGAGACATTTACAACAAAGGGCCCTTGTGTTCACCCCTACAAGTGATCGGCCTATCACGAACTGTGCTTCTGAAGTCTCTTCAAAATGA 1167 0.4987 MDISPSSSSSSSSGALSPDASLDADTPRTPLAVRRALQLLQSDDPDFKLQAARDIRRLTKTSQRCRRQLSQAVGPLVSMLRLDSSESHEPALLALLNLAVKDEKNKISIVEAGALEPIISFLKSQNTNLQECATASLLTLSASATNKPIICASGAIPLLVEILRDGSQQAKADAVMALSNLSTRPDNLCAILETNPIPFIVDLLKTCKKSSKTAEKCCALIESLVGFDEGRTALTSEEGAVLAVIEVLENGNLQSREHAVGALLTMCESDRCKYREPILREGVIPGLLELTVQGTPKSQLKARNLLQLLRETPYPRSEIQPDTLENIVCNIISQIDGDDQSGKAKKMLAEMVQVSMEQSLRHLQQRALVFTPTSDRPITNCASEVSSK 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g1391 388 Gene3D - 29 225 IPR011989 -
Alju07g1391 388 Gene3D - 226 349 IPR011989 -
Alju07g1391 388 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 113 155 IPR000225 GO:0005515
Alju07g1391 388 PANTHER U BOX DOMAIN-CONTAINING 23 316 - -
Alju07g1391 388 MobiDBLite consensus disorder prediction 1 28 - -
Alju07g1391 388 SUPERFAMILY ARM repeat 33 337 IPR016024 -
Alju07g1391 388 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 154 196 IPR000225 GO:0005515
Alju07g1391 388 SMART arm_5 143 183 IPR000225 GO:0005515
Alju07g1391 388 SMART arm_5 61 100 IPR000225 GO:0005515
Alju07g1391 388 SMART arm_5 184 226 IPR000225 GO:0005515
Alju07g1391 388 SMART arm_5 102 142 IPR000225 GO:0005515
Alju07g1391 388 SMART arm_5 227 268 IPR000225 GO:0005515
Alju07g1391 388 MobiDBLite consensus disorder prediction 1 19 - -
Alju07g1391 388 FunFam U-box domain-containing protein 4 19 369 - -
Alju07g1391 388 Pfam Armadillo/beta-catenin-like repeat 146 182 IPR000225 GO:0005515
Alju07g1391 388 Pfam Armadillo/beta-catenin-like repeat 103 137 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g1391 Alju-ChrAlju07 39275225 39278295 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g1391 33 310 U-box Gene Family AT2G23140 33.571 4.34e-38 143
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju07g1391 07 39275225 39278295 Alju07g1391 07 39275225 39278295 CCT
Alju07g1391 07 39275225 39278295 Alju07g1391 07 39275225 39278295 ECH