LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Alju07g1387	ATGGGGTTTTCCCAAGAAACTTTCACTGATTCTTGGGAGCCTTCAACTCCACAAAATGCTCCTGATAATACAGCTGCAGATCGCTACTACGACTATAACAAGCTCAAATTCAGAAGCACTTGGAGAAAAATGATCTGGATGGTTGGGTTTGCCTGTTTTACCCCTTCTCGCCGCCGCCGGAGAAACAACGCCGGTGGGATGATTCAGGGCCAAGACAAAAACAAGGCGTGGCTTCTGGCGGAGTCCGGCGGGTGTCCGGCGGAGTCCACAAATGCGGACCCACAATCCGTTCACTCATCTTTCAGATTCAACATATGTTCTCAGGTCGAGCTAGAATCTCTGGAAATGAACTCCTCCGCCGCCGCGACGGTCTTGATGGTGAATTTGGATAATGGGGTGAGTGAATCTCCAGCTCGGGAGCTAAAATGGTGGTGGAAAATAGATTCACTGAATAAAACCATATTTCCAGGGTCCAATAATACTCTTATCAGATTCAACTACAGTGAAATCCTCTCTGCTACCCACAATTTCTCAGAAGGTAGAGTATTGGGAAGAGGGGCTTTGAGCTGTGTTTTCAGGGGCAAAATTGGAATTCTGAGAAGTGCTGTGGCAATTAAGAGATTGGATAAAGAAGACAAAGAGTGTGCGAAGTCTTTCTGTAGAGAATTGATGATTGCCAGCTCTCTTCACAACCCAAATGTTGTTCCTCTTGTAGGGTTTTGTGCTGATCCAGAGGAGGGTTTATTTCTGGTCTATAAATTTGTCTCAGGAGGCAGCTTAGAACGCCACTTGCATGGGAAGAAGATGAAGGGTGTAAAGGGAAATTCGCCACTACCTTGGTCTGTGAGGTATAAAGTTGCAGTTGGAATTGCAGAAGCAATCTCTTATCTGCATTATGGAACCAAAAGATGTGTTGTTCACAGAGACATTAAGCCCTCTAACATTCTTCTTTCCTCTAGAAAATCTCCCAAGCTATGTGATTTTGGATTAGCAACATGGACTTCAGCACCTTCGGTTCATTTCCTTTGCAAAACTGTTAAAGGAACATTTGGTTATTTGGCTCCTGAGTATTTCCAACATGGGAAGGTGTCAGATAAGACTGATGTTTATGCTTTTGGAGTAGTGTTACTGGAACTCATAACCGGCCGGAAGCCGATTGAGGCGAAAAGGCCACCGGGAGAAGAGAATTTGGTCTCATGGGCGAAACCATTGCTTCAGAAAGGGAAAGGAGCCATTGAAGAGCTGCTTGATCCTCAACTCAATTGCACCTTAAGATCCTCAAATCAGATACGTCGAATGATTGAAGCTGCAACAGCCTGCATCACACACGAAGAATCTCGAAGACCCGGCATCAAAGAGATCATCTCGACGCTGAGAGGCGAAGAACCGATCTCCTCTAAAAGGAGGAAGCCTTCTTTAAGTGCTTATGGATCTGTAATGGATTCTTATCCTCAGTTACTAGAAACAAACACAGATTTCAAAGGTCACTTGGCTTTGGCTATGTTAGGTGTTTCAGAGTTTGAGGATGATGATTACCTCTTTGGTCGTTAA	1551	0.4475	MGFSQETFTDSWEPSTPQNAPDNTAADRYYDYNKLKFRSTWRKMIWMVGFACFTPSRRRRRNNAGGMIQGQDKNKAWLLAESGGCPAESTNADPQSVHSSFRFNICSQVELESLEMNSSAAATVLMVNLDNGVSESPARELKWWWKIDSLNKTIFPGSNNTLIRFNYSEILSATHNFSEGRVLGRGALSCVFRGKIGILRSAVAIKRLDKEDKECAKSFCRELMIASSLHNPNVVPLVGFCADPEEGLFLVYKFVSGGSLERHLHGKKMKGVKGNSPLPWSVRYKVAVGIAEAISYLHYGTKRCVVHRDIKPSNILLSSRKSPKLCDFGLATWTSAPSVHFLCKTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELITGRKPIEAKRPPGEENLVSWAKPLLQKGKGAIEELLDPQLNCTLRSSNQIRRMIEAATACITHEESRRPGIKEIISTLRGEEPISSKRRKPSLSAYGSVMDSYPQLLETNTDFKGHLALAMLGVSEFEDDDYLFGR	516

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Alju07g1387	516	Pfam	Protein kinase domain	178	455	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Alju07g1387	516	Gene3D	Phosphorylase Kinase; domain 1	162	254	-	-
	Alju07g1387	516	FunFam	Putative receptor-like serine/threonine-protein kinase	255	473	-	-
	Alju07g1387	516	FunFam	probable serine/threonine-protein kinase PBL7	136	254	-	-
	Alju07g1387	516	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	305	317	IPR008271	GO:0004672\|GO:0006468
	Alju07g1387	516	MobiDBLite	consensus disorder prediction	1	23	-	-
	Alju07g1387	516	SUPERFAMILY	Protein kinase-like (PK-like)	155	458	IPR011009	-
	Alju07g1387	516	ProSiteProfiles	Protein kinase domain profile.	177	465	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Alju07g1387	516	MobiDBLite	consensus disorder prediction	1	24	-	-
	Alju07g1387	516	Gene3D	Transferase(Phosphotransferase) domain 1	255	474	-	-
	Alju07g1387	516	SMART	serkin_6	177	465	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Alju07g1387	516	PANTHER	OS08G0249100 PROTEIN	153	469	IPR046958	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Alju07g1387	Alju-ChrAlju07	39197318	39200139	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Alju07g1387	157	478	Trihelix Transcription Factor Family	AT1G70460	41.159	2.32e-70	236

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_RLCK-VI	Alju07g1387		Pkinase	1.7e-43	CL0016