Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Alju07g1379 | ATGGTGTTCTTGAGGAATCGCCTGCAAATTCACGTAAAGAGAGGCTATGATCTTGATATCAGATATGGCCGAACTAGTAATGCTTCTGTTGTCATCAAAATTGGTGACGAGGAAAGGAATACTGGAGTGGTAAAGAAGAATGTGAATCCTGAGTGGAATGAAGAGTTGATTTTCCCTCTGGAAAATCCACACCTCCCAGTTCAACTTTGGAGAAGCATCGAAACTTTAGAATCTAGGGATGTCAATGAGGCCACGCAAGCTTGGTCTCCCCAAATTTTCTTGAAATTAATGGAGAAGAAAACAGGTGGTGGGTTGAGGAAAGGAACCTGGACCCAAGAGGAAGACGATCTTCTCAGAGCTTGCATTCACAAGTATGGAGAAGGAAAATGGCATCTTGTTCCTCAAAGAGCTGGCTTGAAGAGATGCAGGAAAAGCTGCAGAATGAGATGGTTGAATTATCTGAAACCCAACATCAACCGAACAAGCTTCACTGAAGACGAGGTTGATATGATTCGAAGGTTCCATAAACTTCTCGGCAACAGATGGTCATTGATAGCTGGAAGGCTACCGGGAAGAACAGCGAACGACGTGAAGAACTTCTGGTACACCAACATGCGCAATAGGAAGAAGAAAGAAGAAAGCCAAGAGACAAAAGCAAAAGAGGTGGTAGTTCATAATACTCTAGAGAAGACAACGACAGACGAAGTAAAACCGCACGTAGTGGTAAAACCTCAGCCTCATACTTTCTCTAAGAATTCGCCGTGGCTGAGGAGAAATACTAATAATAGTAATACTAATGAAAATAAGAAGACTGTTTCTGCAAGTGAGGGTGATGCAGCAGCCAGAACTAGTTCAGGTGATTTCAAAGAGGGTATTGCAGAGCCATGTGCTGCAGCTTATTTTACTCAGAGAGATCATCATCTGTCTGAAGAGTGGTGGGAGAGTTTAATGGACAAGGAAGCAGATGAAGGGCAGTTTGGGGATTTCGCCATGGAGTTATGGGACTCTGACTTTCTAAAACTGAAAGGTCAATTTGGGGAAGGCAAGAGTTGTAGGGGTCACTGTTCATGTAAGTTCTAA | 1080 | 0.4324 | MVFLRNRLQIHVKRGYDLDIRYGRTSNASVVIKIGDEERNTGVVKKNVNPEWNEELIFPLENPHLPVQLWRSIETLESRDVNEATQAWSPQIFLKLMEKKTGGGLRKGTWTQEEDDLLRACIHKYGEGKWHLVPQRAGLKRCRKSCRMRWLNYLKPNINRTSFTEDEVDMIRRFHKLLGNRWSLIAGRLPGRTANDVKNFWYTNMRNRKKKEESQETKAKEVVVHNTLEKTTTDEVKPHVVVKPQPHTFSKNSPWLRRNTNNSNTNENKKTVSASEGDAAARTSSGDFKEGIAEPCAAAYFTQRDHHLSEEWWESLMDKEADEGQFGDFAMELWDSDFLKLKGQFGEGKSCRGHCSCKF | 359 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Alju07g1379 | 359 | CDD | SANT | 109 | 154 | IPR001005 | - | |
| Alju07g1379 | 359 | Pfam | C2 domain | 7 | 69 | IPR000008 | - | |
| Alju07g1379 | 359 | PANTHER | TRANSCRIPTION FACTOR MYB8-RELATED-RELATED | 104 | 296 | - | - | |
| Alju07g1379 | 359 | FunFam | Myb transcription factor | 107 | 159 | - | - | |
| Alju07g1379 | 359 | CDD | SANT | 162 | 205 | IPR001005 | - | |
| Alju07g1379 | 359 | Gene3D | - | 107 | 159 | - | - | |
| Alju07g1379 | 359 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 159 | 209 | IPR017930 | - | |
| Alju07g1379 | 359 | Gene3D | - | 162 | 233 | - | - | |
| Alju07g1379 | 359 | MobiDBLite | consensus disorder prediction | 246 | 280 | - | - | |
| Alju07g1379 | 359 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 7 | 67 | IPR035892 | - | |
| Alju07g1379 | 359 | ProSiteProfiles | C2 domain profile. | 1 | 131 | IPR000008 | - | |
| Alju07g1379 | 359 | Pfam | Myb-like DNA-binding domain | 107 | 154 | IPR001005 | - | |
| Alju07g1379 | 359 | Pfam | Myb-like DNA-binding domain | 160 | 203 | IPR001005 | - | |
| Alju07g1379 | 359 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 105 | 158 | IPR017930 | - | |
| Alju07g1379 | 359 | ProSiteProfiles | Myb-like domain profile. | 155 | 205 | IPR001005 | - | |
| Alju07g1379 | 359 | Gene3D | C2 domain | 3 | 84 | IPR035892 | - | |
| Alju07g1379 | 359 | SUPERFAMILY | Homeodomain-like | 105 | 201 | IPR009057 | - | |
| Alju07g1379 | 359 | ProSiteProfiles | Myb-like domain profile. | 102 | 154 | IPR001005 | - | |
| Alju07g1379 | 359 | MobiDBLite | consensus disorder prediction | 245 | 287 | - | - | |
| Alju07g1379 | 359 | SMART | sant | 106 | 156 | IPR001005 | - | |
| Alju07g1379 | 359 | SMART | sant | 159 | 207 | IPR001005 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Alju07g1379 | Alju-ChrAlju07 | 39074167 | 39080281 | Dispersed/Tandem |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Alju07g1379 | 104 | 253 | MYB Transcription Factor Family | AT1G66370 | 62.092 | 1.41e-56 | 183 |
Transcription factors information