Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g1378 ATGGAGAAGCGTCTCATAGTTCACGTCAAGCGAGGCTTGAATCTTGCCATCAGAGACGCCACAAGCAGCGATCCTTACGTTCTCATCAAAATGGGCAACCAGAAATTGAAGACTCGAGTGGTGGAGAAGAATATCAATCCTGAGTGGAATGAAGATTTGGCCTTTTCCATTTTAGATCCACATCTCCCAGTCCATCTTTTTGTGTATGACAAGGACACATTTTTTGATGACAAAATGGGGGAGGCTGAGTTTGACATCAATCCATTTATTGAAGCCTTGAAGACCGGGTGGTTGGTGGAAGAAGGCGTGCTGGATGGAACAATCATCACAACAATTGAACCGAACCAGCGAAACTGTCTGGCTGAGGAGAGCCAAATTGTGTGGAAAGATGGCAAAGTTGTTCAGAACATGTTTCTTAGGCTGAAGAATGTGGAATGTGGGGAAGTAGAGCTCCAATTATCAATGGAGAACATGTTGGGTCTGCTCAGAATCCGAGTCCAGAGAGGTGTGAAACTTGCTATCAGAGATATCATCACCAGAAGCAGTGATCCTTGTGTTGTCTTCCAAATGGGCAAGCAGAAATTGAAGAGTCGAGTAGTGAAGAGGAGTCTCAATCCTGAATGGAATGAAGAGTTAACTTTATGTATTTCAGATCCTCCTCTCCCAGTCCATCTTTTTGTGTATGACAGAGACATGGGTTTTGATGACAAGCTGGGGGAGGCTGAGTTGGATATTAATCCATTTGTCGAAGCTGTGATGAGGCAGCAGCCAGGTGGCCTGCCACGTGGAGGAGCTATCCTTAAAAGAATAAAACCGAACCAGGGAAACTGCTTGGCTGAAGAAAGCCAAATTGTGTGGAAAGATGGCCAAATAGTCCAAGACTTGGTTCTTAAGCTAAAAAAAGTGGAATCTGGTGAAGTGGAACTCCAATTGTATTGGATTCACATTCCTCCTTCCAATACTTTCTAG 969 0.4427 MEKRLIVHVKRGLNLAIRDATSSDPYVLIKMGNQKLKTRVVEKNINPEWNEDLAFSILDPHLPVHLFVYDKDTFFDDKMGEAEFDINPFIEALKTGWLVEEGVLDGTIITTIEPNQRNCLAEESQIVWKDGKVVQNMFLRLKNVECGEVELQLSMENMLGLLRIRVQRGVKLAIRDIITRSSDPCVVFQMGKQKLKSRVVKRSLNPEWNEELTLCISDPPLPVHLFVYDRDMGFDDKLGEAELDINPFVEAVMRQQPGGLPRGGAILKRIKPNQGNCLAEESQIVWKDGQIVQDLVLKLKKVESGEVELQLYWIHIPPSNTF 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g1378 322 ProSiteProfiles C2 domain profile. 145 260 IPR000008 -
Alju07g1378 322 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 142 249 IPR035892 -
Alju07g1378 322 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 5 155 IPR044562 -
Alju07g1378 322 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 4 97 IPR035892 -
Alju07g1378 322 CDD C2_ArfGAP 5 147 - -
Alju07g1378 322 Gene3D C2 domain 1 113 IPR035892 -
Alju07g1378 322 Gene3D C2 domain 141 316 IPR035892 -
Alju07g1378 322 SMART C2_3c 4 98 IPR000008 -
Alju07g1378 322 SMART C2_3c 161 257 IPR000008 -
Alju07g1378 322 ProSiteProfiles C2 domain profile. 1 98 IPR000008 -
Alju07g1378 322 Pfam C2 domain 160 247 IPR000008 -
Alju07g1378 322 Pfam C2 domain 4 93 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g1378 Alju-ChrAlju07 39067001 39070493 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g1378 194 317 C2H2 Transcription Factor Family AT1G70790 52.381 3.48e-35 123