Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g1377 ATGGAGAACTTGTTGGGTCTGCTAAGAATTCGCGTCCAGAGAGGCGTGAATCTCGCTGTTAGAGATGTTGTAAGCAGCGATCCTTACGTTGTCGTCAAAATGGGCAAGCAGAAACTGAAGACTCGAGTGGTAAAACAGGATATCAATCCTGAGTGGAATGATGAATTGACCTTATCTATTTCAGATCCTCGTCTCCCAGTCCATCTGCATGTGTATGACAAAGACAGATTCAGTTTTGATGACAAAATGGGGGAGGCTGAGTTTGACATTATTCCCTTTATCGAAGCCGTGAAGATGCAGTTGAAAGACCTCCCGGACGGGACCATTGTCACGAGAATTCCGCCGAACCGACAAAACTGTCTTGCTGAAGAGAGCCATATCCTGTGGAAAGAAGGCAAAGTTGTCCAAAACATGGTTCTAAGACTGAAAAATGTAGAGTCAGGGGAAGTGGAGCTCCAATTGCAATGGATTGACATTCCTGGTTCCAGGGGTCTGTAG 498 0.4578 MENLLGLLRIRVQRGVNLAVRDVVSSDPYVVVKMGKQKLKTRVVKQDINPEWNDELTLSISDPRLPVHLHVYDKDRFSFDDKMGEAEFDIIPFIEAVKMQLKDLPDGTIVTRIPPNRQNCLAEESHILWKEGKVVQNMVLRLKNVESGEVELQLQWIDIPGSRGL 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g1377 165 SMART C2_3c 7 102 IPR000008 -
Alju07g1377 165 Gene3D C2 domain 4 160 IPR035892 -
Alju07g1377 165 CDD C2_ArfGAP 5 148 - -
Alju07g1377 165 ProSiteProfiles C2 domain profile. 1 106 IPR000008 -
Alju07g1377 165 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2 157 IPR035892 -
Alju07g1377 165 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 3 163 IPR044562 -
Alju07g1377 165 Pfam C2 domain 6 90 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g1377 Alju-ChrAlju07 39061571 39064105 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g1377 38 165 C2H2 Transcription Factor Family AT1G70790 60.000 1.54e-52 162
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju07g1377 07 39061571 39064105 Alju07g1377 07 39061571 39064105 ECH
Alju09g0185 09 2364496 2366759 Alju07g1377 07 39061571 39064105 ECH