Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g1356 ATGAAGAGAGATTACCCAGATAACAGTACTGTTGGTGGTAGTGTGAAGGCTGAATGTTCGTCAAGGTCCAGTGGAAAGATGAAGATGTGGGAGGATGAGCTCGATGGTTCCGGTGCGATGGATGAGTTGCTGGCGGCTTTGGGCTACAAGGTCCGGTCGTCGGACATGGCGGATGTGGCCCAGAAGCTTGAGAAGCTTGAGATGGTTATGGCCACATCTCAGGAAGATGGGATATCTCATCTTGCTTCTGACACTATCCACTATGACCCCACCGATCTCCATGGTTGGGTTCAAAGCATGCTTACCGAGCTCGACGGTTCACTCAATTGTCTCGATCCGTCGGCGCTGTTGGCGAACCAACAAATTGGTGACAATATTCTGGCTCCCGCTGGGCCCTCCGTCGTATCCACCGGGAATTTCTCCAATTCTCAGCAGCAGATTGGGAATCTGTCCACTGTTTACCACGATGATTCCGAGTACGACCTCCGAGCAATTCCTGGCAAGGCGGCGTTCCCACAAAGCAAAACGACAGATAGTGAAAATAGCCCTAAGCGATTGAAAACTTCACCATCAATTGAATCTGTCCCGTCGCCGCCCCCGGCAACTGTACCAGAGCAAGCGCGTCCGGTGGTTCTCGTTGACTCCCAGGAAAACGGGGTGCGTCTCGTGCACGCGCTGATGGCATGTGCGGAGGCGGTTCAGCAAAGCAATTTGAAGCTGGCGGAAGCACTTGTGGAGCACGTGGGCCGGCTTGCCGCGTCTCAAGCCGGAGCAATGAGGAAGGTGGCTTCCTGCTTCGCTCAAGCTTTAGTTTACCGGATTTACGGAATCTCACAACCGTCCATCGATTCGGCTCTCTCCGATATGCTCTATATGCATTTCTATGAATCCTGCCCTTACCTTAAATTCGCCCATTTCACGGCGAACCAAGCTATACTTGAAGCGTTCGCCACCGCTGAAAGAGTTCATGTCATCGATTTCGGGCTCAAGCAGGGGATGCAATGGCCGGCATTAATGCAAGCCCTTGCATTACGACCTGGTGGTCCTCCGACGTTCCGCCTCACCGGAATCGGACCACCGCAACCGGACAACACCGATGCTCTTCAACAAGTCGGATGGAAATTGGCGCAATTGGCCAAAACCATCGGTGTCCAATTCGAATTCCGCGGGTTCGTCTGCAACAGCTTGGTGGATCTTGAGCCGTCGCTTATCGAGATCCGACCCGGAGAAGCAGTTGCGGTTAACTCCGTTTTCGAACTCCACGAGCTCCTGGCCCGACCTGGCGCCATCGACAAGGTCTTGAACACGATCAAGTTTGTGAATCCCAAGATCGTGACTGTGGTGGAGCAAGAAGCAAACCACAACGAGCCGGTTTTCTTGGACCGTTTCACAGAAGCACTACACTACTACTCAACCATGTTCGACTCACTGGAGGGCTCGTCATCGGCGTCGGGGTTATCGCCGGCGGCAAGTCAGGAGGTGCTGATGTCGGAGCTGTATCTAGGGAGACAGATATGCAACGTGGTGGCGTGTAAAGGGTCAGAGCGAGTGGAGAGGCACGAGACACTGAGTCAGTGGAGGGGTCGGATGGGATCGGCCGGGTTCGAACCGGTTCACCTGGGTTCTAACGCGTTCAAGCAAGCCAGCATGTTATTGGCAGTGTTCGCCGGAGGAGATGGGTACAGGGTGGAAGAGAACAACGGTTGCCTTCTCCTAGGGTGGCACACTCGGCCCCTCATAGCCACGTCGGCTTGGAAAATTCCGGCCGTCGAACTTTAG 1779 0.543 MKRDYPDNSTVGGSVKAECSSRSSGKMKMWEDELDGSGAMDELLAALGYKVRSSDMADVAQKLEKLEMVMATSQEDGISHLASDTIHYDPTDLHGWVQSMLTELDGSLNCLDPSALLANQQIGDNILAPAGPSVVSTGNFSNSQQQIGNLSTVYHDDSEYDLRAIPGKAAFPQSKTTDSENSPKRLKTSPSIESVPSPPPATVPEQARPVVLVDSQENGVRLVHALMACAEAVQQSNLKLAEALVEHVGRLAASQAGAMRKVASCFAQALVYRIYGISQPSIDSALSDMLYMHFYESCPYLKFAHFTANQAILEAFATAERVHVIDFGLKQGMQWPALMQALALRPGGPPTFRLTGIGPPQPDNTDALQQVGWKLAQLAKTIGVQFEFRGFVCNSLVDLEPSLIEIRPGEAVAVNSVFELHELLARPGAIDKVLNTIKFVNPKIVTVVEQEANHNEPVFLDRFTEALHYYSTMFDSLEGSSSASGLSPAASQEVLMSELYLGRQICNVVACKGSERVERHETLSQWRGRMGSAGFEPVHLGSNAFKQASMLLAVFAGGDGYRVEENNGCLLLGWHTRPLIATSAWKIPAVEL 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g1356 592 MobiDBLite consensus disorder prediction 172 192 - -
Alju07g1356 592 MobiDBLite consensus disorder prediction 167 205 - -
Alju07g1356 592 Gene3D - 39 104 IPR038088 -
Alju07g1356 592 SMART DELLA_2 41 114 - -
Alju07g1356 592 ProSiteProfiles GRAS family profile. 213 586 IPR005202 -
Alju07g1356 592 Pfam Transcriptional regulator DELLA protein N terminal 41 106 IPR021914 -
Alju07g1356 592 FunFam DELLA protein GAI 39 104 - -
Alju07g1356 592 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 181 582 IPR005202 -
Alju07g1356 592 Pfam GRAS domain family 222 586 IPR005202 -
Alju07g1356 592 Coils Coil 56 76 - -
Alju07g1356 592 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g1356 Alju-ChrAlju07 38786424 38788202 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g1356 26 587 GRAS Transcription Factor Family AT2G01570 60.169 0.0 673
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Alju07g1356 GRAS 6.1e-137 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju07g1356 07 38786424 38788202 Alju07g1356 07 38786424 38788202 CCT
Alju07g1356 07 38786424 38788202 Alju07g1356 07 38786424 38788202 ECH
Alju07g1356 07 38786424 38788202 Alju10g0158 10 1172895 1175219 ECH