Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g1337 ATGGCTACTCCCTTGGATATGTCACTTGATGATAGAATAAAAACCAGAAGTAACAGGGAGAGGGGGAGAGGGCGTGGCAGAGCCCCCCGTGGCCGTGGAGCAGGTCAGAATCTTGGTGGCGGAAGGATGCCTCGTGCAGCTCGAAGAGCTCCTCTTGGAATTAATTCTCGGCCATCCGCTTATGCCATTGCCAAGTGTTTGATGATTGGTTGTGTGACCAGCATTTTAATGGATCCTCTTGCTAAGTTGGTTCTACGGTGCAAGATTTCAGTTAACTTCCCTAGTTCATGGTATTTTGCAAAGGAGCTTCCTTCACGTAACTTCAGAACTGGAGCTCTCACTTGTAGCATAGCGCCTGTTTATTCCATTCGCAGAACCAGGCGTTTTCCATGGCAGCATGATTTATTTGAAGATAGCCTAAAAGCAGCAGGGATACAAGGAGTAGAAGTAGGCACAAAGTTGTATGTTTCCAACTTGGACCATGGAGTAACCAACGAAGATATAAGGGAACTGTTTGCGGAGATTGGAGACCTGAAGCGTTATGCAGTTCACTATGACAGAAATGGACGTCCTAGTGGTTCAGCTGAAGTCGTCTATACTAGAAGGAGTGATGCATTTGCAGCTCTTAAACGATACAACAATGTACTTTTGGATGGAAAGCCCATGAAGATTGAGGTTGTTGGTGCCAGTGCAGAATTGCCTATATCGGCTCGTGTGAATGTTTCTGGGATAAATGGGCAGAGGAAGAGGACAGTTGTCATGACGCCTGGAGGTCGACCTGGAGCTAGTGCTGGAGGTCCTGCTATGTTTAATCGTGGTGGGGGTTGGGTACGGCGTGGTGGTGGAAGGAGCGGTGGTGGGGGTATGCGTGGTCGAGGAGGCAGTGGACGAGGTAGGGGTAGGGGTAGGGGTCGTGGTCGAGGGCGTGGGAAGAAGGATGCAGTTGACAAGTCTGCTGAGGAACTTGACAAGGAACTGGAGACTTATCATGCTGAGGCCATGCACATCTCTTGA 1014 0.4941 MATPLDMSLDDRIKTRSNRERGRGRGRAPRGRGAGQNLGGGRMPRAARRAPLGINSRPSAYAIAKCLMIGCVTSILMDPLAKLVLRCKISVNFPSSWYFAKELPSRNFRTGALTCSIAPVYSIRRTRRFPWQHDLFEDSLKAAGIQGVEVGTKLYVSNLDHGVTNEDIRELFAEIGDLKRYAVHYDRNGRPSGSAEVVYTRRSDAFAALKRYNNVLLDGKPMKIEVVGASAELPISARVNVSGINGQRKRTVVMTPGGRPGASAGGPAMFNRGGGWVRRGGGRSGGGGMRGRGGSGRGRGRGRGRGRGRGKKDAVDKSAEELDKELETYHAEAMHIS 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g1337 337 MobiDBLite consensus disorder prediction 1 47 - -
Alju07g1337 337 Gene3D - 147 228 IPR012677 -
Alju07g1337 337 SMART FoP_duplication_2 260 337 IPR025715 -
Alju07g1337 337 Pfam C-terminal duplication domain of Friend of PRMT1 276 331 IPR025715 -
Alju07g1337 337 SMART rrm1_1 153 225 IPR000504 GO:0003723
Alju07g1337 337 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 154 222 IPR000504 GO:0003723
Alju07g1337 337 CDD RRM_THOC4 152 225 - -
Alju07g1337 337 SUPERFAMILY RNA-binding domain, RBD 146 226 IPR035979 GO:0003676
Alju07g1337 337 MobiDBLite consensus disorder prediction 309 323 - -
Alju07g1337 337 Coils Coil 312 332 - -
Alju07g1337 337 MobiDBLite consensus disorder prediction 9 24 - -
Alju07g1337 337 PANTHER RNA AND EXPORT FACTOR BINDING PROTEIN 5 335 - -
Alju07g1337 337 MobiDBLite consensus disorder prediction 255 323 - -
Alju07g1337 337 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 152 229 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g1337 Alju-ChrAlju07 38620764 38623638 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g1337 151 310 Eukaryotic Initiation Factors Gene Family AT2G23350 29.293 1.64e-09 57.4