Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g1332 ATGGGAAGGCAACCTTGCTGTGACAAAGTTGGACTGAAGAAAGGTCCTTGGACTGCTGATGAAGACAAGAAACTCATTAACTTCATCCTCACCAATGGCCAATGTTGCTGGAGGACTGTACCTAAGCTTGCAGGGCTATTGAGATGTGGGAAAAGTTGCAGGCTGAGATGGACCAATTACCTCAGACCAGACTTGAAGAGAGGTCTTCTTTCTGAATTTGAAGAGAAAATGGTGATTGATCTCCACGCTCAACTTGGCAACAGATGGTCTAAGATTGCGTCTCATCTTCCTGGAAGAACTGATAATGAGATCAAGAACCATTGGAACACACACATCAAGAAGAAGCTCAAGAAAATGGGGATTGACCCTGTTACTCACAAGCCTCTCTCTGATCAACAACAACAAAACCAGAATAATCCGCCATCACAGATTAATCAAGTTCAGATACAACAACAGAATCAGCAACCTGTGACAACTAGCTCCAAGATTGATCCAAATGGAGAAACAGACAAGGTAGAGACCTCGTACGAGTCATCATCGACCTTAACTGAATCGAAAGAGGAGGAAAAGGTTGAAACCCCACCATTTGGCCATATCATGAACAGTTTCTGCACTGATGAGGTTCCCTTAATTGAACCTGATGAGATTCTAATGCCCTCTGGTCCAACCCCTTCGTCTTCTTCATCGTCCTCTTCTTCTTCTTCTTATTCAAATTCTTCCAACTTCCTCGTAGACCTGGAGCTCCCAGACTTCGAGTGGGCTTGTAATTACAGTGACGATAACAGCAACAACAACAACAACAACAGTATTATGGGATTGTGGGATTGTGATGATGATTTGATGAGCGGTTGGGATTTGCTTTTGAAGGATGATGACTGTGTTGGAGACAGGAAGATGGCAGATTTTGATCCTCCTCTCAAACAATGTTCAAGAATGTTCATGGATCAAGAATCTTGGGCATATGGGTTTTGA 972 0.4321 MGRQPCCDKVGLKKGPWTADEDKKLINFILTNGQCCWRTVPKLAGLLRCGKSCRLRWTNYLRPDLKRGLLSEFEEKMVIDLHAQLGNRWSKIASHLPGRTDNEIKNHWNTHIKKKLKKMGIDPVTHKPLSDQQQQNQNNPPSQINQVQIQQQNQQPVTTSSKIDPNGETDKVETSYESSSTLTESKEEEKVETPPFGHIMNSFCTDEVPLIEPDEILMPSGPTPSSSSSSSSSSSYSNSSNFLVDLELPDFEWACNYSDDNSNNNNNNSIMGLWDCDDDLMSGWDLLLKDDDCVGDRKMADFDPPLKQCSRMFMDQESWAYGF 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g1332 323 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Alju07g1332 323 MobiDBLite consensus disorder prediction 220 235 - -
Alju07g1332 323 FunFam MYB transcription factor 70 148 - -
Alju07g1332 323 MobiDBLite consensus disorder prediction 214 235 - -
Alju07g1332 323 MobiDBLite consensus disorder prediction 123 199 - -
Alju07g1332 323 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Alju07g1332 323 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 251 - -
Alju07g1332 323 FunFam MYB transcription factor 11 67 - -
Alju07g1332 323 CDD SANT 16 61 IPR001005 -
Alju07g1332 323 Gene3D - 70 154 - -
Alju07g1332 323 MobiDBLite consensus disorder prediction 127 165 - -
Alju07g1332 323 Gene3D - 11 67 - -
Alju07g1332 323 SMART sant 66 114 IPR001005 -
Alju07g1332 323 SMART sant 13 63 IPR001005 -
Alju07g1332 323 Pfam Myb-like DNA-binding domain 71 111 IPR001005 -
Alju07g1332 323 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Alju07g1332 323 CDD SANT 74 112 IPR001005 -
Alju07g1332 323 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Alju07g1332 323 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Alju07g1332 323 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g1332 Alju-ChrAlju07 38560971 38562302 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g1332 1 291 MYB Transcription Factor Family AT1G66230 56.856 2.73e-98 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Alju07g1332 Myb_DNA-binding 5.7e-12 CL0123