Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g1307 ATGGGTGGGAGTTTTTTCAGGGTACTTATTTAGCTGCGCGTCGACGCTCCATCGCCTTGTCCTCCGGTACTTGGTCTTCGTCCCTCAGCTGCTGTTCTTTCCTTGTCTTTGCCTCCGTCTTCACTTCGTCACTGCGCCGTCACTCCCCGTGAAAGCTGTTTTCTAGGTGTGCAGTGTTCCTTTCACCCTCTCTGTAAATTAAATAGGAAAACCATGAGGAAGCTGAAGTTTCATGAGAAGAAGCTATTGAAGAAGGTAAATTTCTTAGAGTGGAAGAGAGAAGGAGGTCACAGAGAAAATCATGTTATGCAACGCTATCATGTTACTGGACGTGATGATTACAAGAAATATTCGAGTCTGTGCCGGATGGTGCAAAAGCTAGTAAACATGCTGAAGCAAATGGACCCAAAAGATCCATTTCGGATTGAGATGACTGATAGGCTCTTAGAAAAGCTGTACAATATTGGTGTGATTCCAACCAGGCAAAGTATTACACTTTGTGAACGTTTAACAGTGTCATCCTTTTGTAGGCGAAGGCTGGCAACTGTTTTGGTGCGATTAAAATTTGCAGAGTACTTGAAAGAAGCGGTGACGTACATTGAACAAGGGCATGTAAGAGTTGGTCCAGAGACAATCACTGACCCAGCATTCCTGGTAACCAGAAATATGGAAGACTTCATCACATGGGTGGATTCATCAAAGATAAAGAGAAAGGTTCTACAGTACAATAACAAATTGGATGACTATGATTTAATGAACTGA 762 0.4291 MGGSFFRVLIXLRVDAPSPCPPVLGLRPSAAVLSLSLPPSSLRHCAVTPRESCFLGVQCSFHPLCKLNRKTMRKLKFHEKKLLKKVNFLEWKREGGHRENHVMQRYHVTGRDDYKKYSSLCRMVQKLVNMLKQMDPKDPFRIEMTDRLLEKLYNIGVIPTRQSITLCERLTVSSFCRRRLATVLVRLKFAEYLKEAVTYIEQGHVRVGPETITDPAFLVTRNMEDFITWVDSSKIKRKVLQYNNKLDDYDLMN 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g1307 253 PANTHER 30S 40S RIBOSOMAL PROTEIN 76 249 IPR022801 GO:0003735|GO:0015935|GO:0019843
Alju07g1307 253 SMART s4_6 178 245 IPR002942 GO:0003723
Alju07g1307 253 CDD S4 178 239 - -
Alju07g1307 253 Pfam Ribosomal protein S4/S9 N-terminal domain 74 176 IPR001912 GO:0019843
Alju07g1307 253 FunFam U3 small nucleolar ribonucleoprotein IMP3 178 250 - -
Alju07g1307 253 SUPERFAMILY Alpha-L RNA-binding motif 97 246 - -
Alju07g1307 253 ProSiteProfiles S4 RNA-binding domain profile. 178 244 - -
Alju07g1307 253 Gene3D - 178 253 IPR036986 GO:0003723
Alju07g1307 253 Pfam S4 domain 178 224 IPR002942 GO:0003723
Alju07g1307 253 SMART Ribosomal_S4_2 74 177 IPR001912 GO:0019843
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g1307 134 219 Cytoplasmic Ribosomal Protein Gene Family AT5G39850 32.184 2.61e-08 50.8